Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colius_20striatus_20[refseq_20GCF_5F000690715.1_202014-05-13] 70,188 sequences; 1,075,931,597 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq4510 100 4e-16 >seq4510 Length=123898 Score = 100 bits (110), Expect = 4e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||| |||| || | || || || || ||| ||||||| | || ||||||| Sbjct 3305 TGGGGCAGGAGGTGTTCGGTTTGGTCCCAGGCTTGATGATGTACGCAACAATATGGCTGA 3364 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | ||||||||| |||| || ||| | |||||||| |||||||| || ||| | || || | Sbjct 3365 GGGAGCACAACCGGGTCTGTGACATCCTGAAACAGGAGCACCCTGAGTGGGATGATGAGC 3424 Query 214212 AGCTGTTCCA 214221 |||||||||| Sbjct 3425 AGCTGTTCCA 3434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722706176949120