Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2326 89.7 1e-12
seq1614 89.7 1e-12
>seq2326
Length=18113
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 825 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 884
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 885 CCCACGCTGGGC 896
>seq1614
Length=31163
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 12571 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 12512
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 12511 CCCACGTTGGGC 12500
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 13320 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13261
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 13260 CCCACGCTGGGC 13249
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 15834 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 15775
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 15774 CCCACGTTGGGC 15763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057621743059490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |