Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq266 114 3e-20
seq682 95.1 3e-14
>seq266
Length=585698
Score = 114 bits (126), Expect = 3e-20
Identities = 117/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| |||||||| || ||||||| ||||| || || || || |||
Sbjct 268048 GCCCAGCAGCTCTGGTACGCCATCATCGAGTCGCAGACGGAGACCGGCACGCCGTACATG 268107
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
|||||||||| | |||||||||||| |||||||||| |||| || || || ||
Sbjct 268108 CTGTACAAAGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGC 268167
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || ||||| | || ||||||
Sbjct 268168 AGCAACCTGTGCACGGAGATCGTGGAGTACACC 268200
>seq682
Length=840739
Score = 95.1 bits (104), Expect = 3e-14
Identities = 123/168 (73%), Gaps = 4/168 (2%)
Strand=Plus/Minus
Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448
||||||||| || || || | |||||| || || |||||||||| |||||||||||
Sbjct 497284 TACAAATGCCAAAGAGCTCTCTGCAAAAGGGGTGAAGATTTGGGATGCTAATGGATCACG 497225
Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506
||| || || ||| ||| ||| | | || || || || ||| | |||||||||
Sbjct 497224 TGAGTTCCTGGATAAGCAG--GGTTTCAGCAGCAGAGAGGAGGGGGATTTGGGACCAGTT 497167
Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554
|| || || || ||| | |||||||| ||||| |||||| ||||||
Sbjct 497166 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 497119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303104397569786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |