Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq366 174 2e-38
>seq366
Length=2320313
Score = 174 bits (192), Expect = 2e-38
Identities = 366/543 (67%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || || ||||| || ||||| | || ||||| ||||| || || ||
Sbjct 1130575 GCACCATAAGCCACAGCTTCATCAGGATTAATGCTCTTGTTCAGCTCTTTGCCATTGAAG 1130634
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
||||| | | | || || || ||||| || || || ||||| |||| |||||
Sbjct 1130635 AAATCCTGCAGAAGCTTCTGGATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 1130694
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|| | | | ||| || || | ||| | || || || | || || || || ||||
Sbjct 1130695 TCGTGGATCTGCGACTTGTCAAGCTTGGCATCCCGCAGGGCCTTCTCCACGGGGTCCAGG 1130754
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
||||||| ||| ||| || ||||| || || | ||||||||| || |||
Sbjct 1130755 GTGCCGCGGAACAGGTCGGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGAGGTGTAG 1130814
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| || | || || || | ||||||||||||||| | | || | | || || |
Sbjct 1130815 AAGTCGATCCCCTCATAGAGAGAATCAATTTCAATGCTGGCCTGCGTGCTGGAGGACAGA 1130874
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || ||||| || || || || | ||||||| ||| | | ||| | |
Sbjct 1130875 GTGCGCTTGGCACGCTCGCAGGCAGTGCGGAGGCGACGAACGGCTCTCTTGTTCTCAGTG 1130934
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456
|| |||||||| || || || || || || | |||||| | || | | | |
Sbjct 1130935 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTTG--- 1130991
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| ||||| ||||||||||| || || || || || | ||| || |||||||| ||
Sbjct 1130992 TCGAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 1131051
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | | | || |||||||| || ||||| || ||||||||||| || |||
Sbjct 1131052 TCTTCAATCGTCAGAATAGACACATCAAAGGTGCCACCTCCAAGGTCAAAAATAAGAACG 1131111
Query 7577 TTC 7579
|||
Sbjct 1131112 TTC 1131114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635014323915320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |