Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11] 14,923 sequences; 1,107,989,085 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq241 91.5 2e-13 >seq241 Length=2400993 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||||||||| || | ||| || ||||| |||||||| | ||||| | |||||||| | Sbjct 1970226 CACCATAAGGCGATCTTGGGTAAAAAGGGGTGGTCTCCTTTTGTGGGATTTCTTGCACTT 1970285 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | ||| |||||||||||||||| ||||| |||| Sbjct 1970286 TTCCAAAAAGTTCACTGGTGGAGGCTTGGTAGA 1970318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665370260338360