Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11] 14,923 sequences; 1,107,989,085 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq266 82.4 9e-11 >seq266 Length=585698 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || | || ||||||||||| || || || || ||||| ||||| || Sbjct 268060 TGGTACGCCATCATCGAGTCGCAGACGGAGACCGGCACGCCGTACATGCTGTACAAAGAC 268119 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || || ||| ||||| ||||| |||| |||| || |||||| || || || ||| Sbjct 268120 GCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGC 268179 Query 75998 ACGGAAATTTTAGAGTACAC 76017 ||||| || | |||||||| Sbjct 268180 ACGGAGATCGTGGAGTACAC 268199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596458317398240