Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq223 295 9e-75
seq12 190 3e-43
seq91 179 5e-40
seq366 165 1e-35
seq714 98.7 1e-15
seq685 87.8 2e-12
seq10037 86.0 8e-12
seq1936 84.2 3e-11
>seq223
Length=4343944
Score = 295 bits (326), Expect = 9e-75
Identities = 993/1532 (65%), Gaps = 27/1532 (2%)
Strand=Plus/Plus
Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418
|| ||||| ||| | || ||||| || ||||| || || || || || ||||| ||
Sbjct 3135555 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACGCCCAGCTATGTGGCCTTCACT 3135614
Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478
|||| || || ||| |||| ||||| || || || ||| || |||||||| | |||
Sbjct 3135615 GATACCGAGCGCCTCATTGGGGATGCTGCCAAGAACCAGGTGGCAATGAACCCCACCAAC 3135674
Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538
|| ||||||| || |||||||| ||||| ||||||| | || | || || |
Sbjct 3135675 ACCATCTTTGATGCCAAGCGTCTCATTGGCCGCAAGTATGATGACCCCACGGTGCAGGCT 3135734
Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598
|| || ||| | ||| | | || || || || | ||||| | | | |
Sbjct 3135735 GACATGAAGCATTGGCCCTTCCGTGTGGTGAA---TGAGGGCGGCAAGCCCAAGGTGCAG 3135791
Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCG-TCTATGGTGTT 195657
|| || | | || |||| ||| | || ||||| || | | | || |||||| |
Sbjct 3135792 GTGGAGTACAAGGGCGAGATGAAG-ACCTTCTTCCCGGAGGAGATCAGCTCCATGGTGCT 3135850
Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717
| ||||||||||||| |||||| | | |||| | || | |||| || |
Sbjct 3135851 TACCAAGATGAAGGAGATTGCGGAGGCCTATCTGGGGCGCAAGGTACAGAATGCTGTCAT 3135910
Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777
|| || ||||||||||||| ||| || || || ||||| || || || |||| | ||
Sbjct 3135911 CACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 3135970
Query 195778 TGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836
| || || || ||| | | |||||||| || || ||||| ||||| || || ||||
Sbjct 3135971 CACTGGCCTTAA-TGTGATGCGTATTATCAACGAGCCCACAGCAGCTGCTATAGCCTATG 3136029
Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890
| |||||||||| | || | || || ||||| | |||||||| | || |
Sbjct 3136030 GCTTGGACAAGAAAGGTACCCGGGCTGGTGAGAAGAATGTGCTCATCTTTGACTTGGGAG 3136089
Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950
| || || |||||||| || | || | ||||| | ||| || || || || ||| | |
Sbjct 3136090 GGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTCAAGTCCA 3136149
Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010
| |||||||| || ||||| ||||| || || || || || | | |||||
Sbjct 3136150 CAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTTTG 3136209
Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070
|| || ||| || ||| | ||| || ||| |||| || | || | | |
Sbjct 3136210 TGGAAGAATTCAAGCGTAAGCACAAGCGTGACATTGCTGGCAACAAGCGAGCGGTGAGGC 3136269
Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130
|||| | || || ||||| | || || || || ||| ||| | | ||| | |
Sbjct 3136270 GGCTGCGTACGGCTTGTGAGAGGGCGAAGCGCACCCTCAGCTCTTCCACACAAGCTAGCA 3136329
Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190
|||||||||| || | | || || || |||||||| || | || || ||||| || |
Sbjct 3136330 TTGAGATTGACTCCCTCTACGAGGGCATCGACTTCTACACCTCCATAACTCGTGCCCGCT 3136389
Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250
|||| ||| | || | ||| | || | |||| || || || | | || |
Sbjct 3136390 TTGAGGAGCTCAATGCCGATCTCTTCCGTGGCACCCTGGAGCCGGTGGAGAAGGCCCTGC 3136449
Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310
|||| || ||| | || ||| || | | || || || || ||||| || || || |
Sbjct 3136450 GTGATGCCAAGCTAGACAAGGGCCAGATCCAGGAGATCGTGCTGGTGGGTGGCTCCACTC 3136509
Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370
|||| || ||||| ||| | |||| |||||||||| |||||| | ||||| |
Sbjct 3136510 GTATCCCAAAGATCCAAAAACTGCTACAGGACTTCTTCAATGGTAAAGAGCTCAACAAGA 3136569
Query 196371 CGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAG 196430
||||| || ||||| || ||||||||||| || || || || |||||||| || | |
Sbjct 3136570 GCATCAATCCTGATGAGGCTGTTGCTTATGGCGCTGCTGTACAAGCTGCTATCCT-TATG 3136628
Query 196431 GTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487
| ||||| | | || || || ||||| || || | ||||| | || | ||||
Sbjct 3136629 --GGAGACAAGTCTGAGAATGTGCAGGATCTGCTCCTGTTGGATGTCACCCCTCTGTCCC 3136686
Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547
|||| | || ||||| || || || ||||| | || | | ||||| || ||||
Sbjct 3136687 TGGGCATCGAGACAGCTGGGGGAGTGATGACAGCTCTCATCAAGCGCAACACCACCATTC 3136746
Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCATATT 196606
| || || | || ||| | || || || || || || | || | || | |
Sbjct 3136747 CCACCAAACAAACCCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GCGTCCTGGTC 3136805
Query 196607 CAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTC 196663
|| || ||||| | |||| ||| || |||| || ||| | | || || | ||
Sbjct 3136806 CAGGTGTATGAGGGTGAGAGGGCT---ATGACAAAAGACAACAACTTGCTGGGCAAGTTT 3136862
Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723
|| | ||||| || || | |||||| | || ||||| ||||| | || || ||
Sbjct 3136863 GACCTAACGGGCATCCCCCCAGCACCCCGTGGGGTTCCCCAGATCGAGGTCACTTTTGAC 3136922
Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783
|| || || ||||| || || || |||| |||| ||||||| | || || |
Sbjct 3136923 ATCGATGCCAATGGTATCCTGAATGTCAGCGCTGTGGACAAGAGCACGGGTAAGGAGAAC 3136982
Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843
||||| || |||||||||||||| || ||| ||||| || || || ||||||||
Sbjct 3136983 AAGATCACCATCACCAATGACAAGGGTCGCCTTAGCAAGGATGACATCGACCGTATGGTG 3137042
Query 196844 CAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875
||||| || || || |||| | ||| || ||
Sbjct 3137043 CAAGAAGCAGAGAAATACAAAGCAGAGGATGA 3137074
>seq12
Length=7699506
Score = 190 bits (210), Expect = 3e-43
Identities = 179/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||||||||| || || || || |||||||| ||||||||| |
Sbjct 4631223 ATGCAGATCTTTGTGAAAACCCTGACCGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 4631164
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || ||| | || |||||||| || || ||||| |||||||| || ||||||
Sbjct 4631163 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 4631104
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || ||||| |||||||| ||||| |||||||| || ||||| | || ||||||
Sbjct 4631103 CAGAGGCTGATTTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 4631044
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || |||||||||||||| || || || || | || ||||||||
Sbjct 4631043 ATCCAGAAGGAGTCTACTCTGCATCTCGTGCTGCGCCTCAGGGGTGGT 4630996
Score = 179 bits (198), Expect = 5e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||||||| | ||||| || || |||||||| ||||||||| |
Sbjct 4631679 ATGCAGATCTTTGTGAAAACCTTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 4631620
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || ||| | || |||||||| || || ||||| |||||||| || ||||||
Sbjct 4631619 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 4631560
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || ||||| |||||||| ||||| |||||||| || ||||| | || ||||||
Sbjct 4631559 CAGAGGCTGATTTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 4631500
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||||| || || || ||| | || ||| | || |||||||
Sbjct 4631499 ATCCAGAAGGAATCCACCCTGCACTTGGTGCTACGTCTCAGGGGTGG 4631453
Score = 176 bits (194), Expect = 6e-39
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||||||| | ||||| || || |||||||| ||||||||| |
Sbjct 4631451 ATGCAGATCTTTGTGAAAACCTTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 4631392
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || ||| | || |||||||| || || ||||| |||||||| || ||||||
Sbjct 4631391 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCTGATCAG 4631332
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || ||||| |||||||| ||||| |||||||| || ||||| | || ||||||
Sbjct 4631331 CAGAGGCTGATTTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 4631272
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || ||||| || ||||| || || || ||
Sbjct 4631271 ATCCAGAAGGAATCCACTCTCCATCTCGTGCT 4631240
>seq91
Length=4318309
Score = 179 bits (198), Expect = 5e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||||| ||||| || || |||||||||||||||||| |
Sbjct 4011711 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 4011770
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || | || |||||||| || || |||||||||||||| || ||||||
Sbjct 4011771 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 4011830
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || ||||||||||| || ||||| ||||| || || ||||| |||| ||||||
Sbjct 4011831 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 4011890
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || ||||| || || || ||||| || ||
Sbjct 4011891 ATCCAGAAGGAATCCACCCTGCACCTGGTGCT 4011922
Score = 170 bits (188), Expect = 3e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||| | ||||| || || ||||| || ||||||||| |
Sbjct 4011939 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTAGAGGTTGAGCCCAGT 4011998
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || | || |||||||| || || |||||||||||||| |||||||||
Sbjct 4011999 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 4012058
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || || ||||| || ||||| |||||||| ||||| || |||| ||||||
Sbjct 4012059 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACTCTGTCTGACTACAAC 4012118
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || ||||| ||||| || ||||| || ||
Sbjct 4012119 ATCCAGAAGGAATCTACCCTGCACCTGGTGCT 4012150
Score = 170 bits (188), Expect = 3e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || ||||| || ||||| ||||| || || |||||||||||||||||| |
Sbjct 4012167 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 4012226
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | || |||||||| || || |||||||||||||| |||||||||
Sbjct 4012227 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 4012286
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || || ||||| || ||||| |||||||| ||||| || |||| ||||||
Sbjct 4012287 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACTCTGTCTGACTACAAC 4012346
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||||| || || || ||||| || || | || |||||||
Sbjct 4012347 ATCCAGAAGGAATCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 4012393
Score = 158 bits (174), Expect = 2e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| |||||||| || ||||| ||||| || || |||||||| ||||||||| |
Sbjct 4011483 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 4011542
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || | || |||||||| || || |||||||||||||| || || |||
Sbjct 4011543 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 4011602
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || || ||||| || ||||| ||||| || || ||||| |||| ||||||
Sbjct 4011603 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 4011662
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || ||||| || || || ||||| || ||
Sbjct 4011663 ATCCAGAAGGAATCCACCCTGCACCTGGTGCT 4011694
Score = 152 bits (168), Expect = 7e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||||| ||||| || || || || || || || ||| |
Sbjct 4012395 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACAATTACTCTTGAAGTGGAGCCCAGT 4012454
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || | || |||||||| || || |||||||||||||| || || |||
Sbjct 4012455 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 4012514
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | || || |||||||| || ||||| ||||| || || ||||| |||| ||||||
Sbjct 4012515 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 4012574
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||||| || || || ||||| || || | || |||||||
Sbjct 4012575 ATCCAGAAGGAATCCACCCTGCACCTGGTGCTGCGCCTGAGGGGTGG 4012621
>seq366
Length=2320313
Score = 165 bits (182), Expect = 1e-35
Identities = 358/533 (67%), Gaps = 6/533 (1%)
Strand=Plus/Minus
Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934
|| ||||| || || ||||| || |||||||| || |||| | ||||||| ||| ||
Sbjct 1131104 ATTTTTGACCTTGGAGGTGGCACCTTTGATGTGTCTATTCTGACGATTGAAGATGGCATC 1131045
Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994
|| || || || | ||||| ||||| ||||| | ||||| ||||| ||||| ||
Sbjct 1131044 TTTGAGGTGAAATCCACTGCAGGTGACACTCACTTGGGTGGAGAAGACTTCGACAACCGC 1130985
Query 195995 CTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAAT 196054
| || || || | ||| ||| || ||| | |||||||| || ||| ||
Sbjct 1130984 ATGGTCAACCACTTCATCGCTGAATTCAAGCGCAAGCACAAGAAAGACATCACTGAGAAC 1130925
Query 196055 CCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCT 196114
|| || ||||||| || | ||||| || || |||||||| || ||||| || ||
Sbjct 1130924 AAGAGAGCCGTTCGTCGCCTCCGCACTGCCTGCGAGCGTGCCAAGCGCACTCTGTCCTCC 1130865
Query 196115 ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACT 196174
| | || | | |||| |||||||| | | ||| || || |||||||| || |
Sbjct 1130864 AGCACGCAGGCCAGCATTGAAATTGATTCTCTCTATGAGGGGATCGACTTCTACACCTCC 1130805
Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234
|||||| | || || ||||||||| | ||| | || |||| | |||| ||
Sbjct 1130804 ATTACCAGAGCTCGCTTTGAAGAGCTGAACGCCGACCTGTTCCGCGGCACCCTGGACCCC 1130745
Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294
|| || | | || || || || ||| | || ||||| || | | || || || ||
Sbjct 1130744 GTGGAGAAGGCCCTGCGGGATGCCAAGCTTGACAAGTCGCAGATCCACGACATCGTGCTG 1130685
Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTT-TCTAGC--TTCTTCAAT 196351
|| || || || || ||||| || ||||| || || |||| | || |||||||||
Sbjct 1130684 GTTGGTGGGTCTACTCGTATCCCAAAGATCCA---GAAGCTTCTGCAGGATTTCTTCAAT 1130628
Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404
||||| | ||||| | || || || |||||||| || |||||||||||
Sbjct 1130627 GGCAAAGAGCTGAACAAGAGCATTAATCCTGATGAAGCTGTGGCTTATGGTGC 1130575
Score = 116 bits (128), Expect = 5e-21
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767
|||| || ||||||||||| || || |||| ||| || || || ||||| ||||| || |
Sbjct 1131356 ATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 1131297
Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827
||| | ||||| || || || ||| |||||||||| || |||||||| ||||| |
Sbjct 1131296 CTGGAACCATTGCTGGGCTCAATGTTCTGCGAATTATCAACGAGCCAACAGCTGCTGCGA 1131237
Query 195828 TTGCTTATGGTCTGGACAAGAA 195849
|||| |||||||||||||| ||
Sbjct 1131236 TTGCCTATGGTCTGGACAAAAA 1131215
Score = 86.0 bits (94), Expect = 8e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGA 196665
|| || |||||||||||||| | | || | ||||| ||| | | || || | || ||
Sbjct 1129784 CAGGTCTATGAAGGAGAACG-TGCAATGACTAAGGACAACAACTTGCTGGGCAAGTTTGA 1129726
Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725
|||| || ||||| |||| ||||||||||| || |||||| | || |||||||||
Sbjct 1129725 GCTGACCGGTATTCCCCCTGCCCCCAGAGGTGTACCTCAGATTGAAGTAACCTTCGATAT 1129666
Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785
|| || || || || || || || | |||| ||| ||| ||||||| | ||
Sbjct 1129665 CGATGCCAACGGCATCCTCAATGTGTCTGCTGTGGATAAGAGCACTGGCAAGGAGAACAA 1129606
Query 196786 GATTGTGATTACCAATGACAAGGG 196809
||| ||||| || ||||||||
Sbjct 1129605 GATCACAATTACAAACGACAAGGG 1129582
>seq714
Length=1871296
Score = 98.7 bits (108), Expect = 1e-15
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022
||||||||| || |||||||| ||||| ||||||||||| || ||||| |||||||||||
Sbjct 363566 AGGCATTCCTCCTGATCAGCAGCGACTGATTTTTGCTGGGAAGCAGCTGGAAGATGGACG 363507
Query 172023 TACCCTCGCTGATTACAACGTTCAAAA 172049
|| || |||| |||||| |||||||
Sbjct 363506 CACGCTGTCTGACTACAACATTCAAAA 363480
>seq685
Length=1810514
Score = 87.8 bits (96), Expect = 2e-12
Identities = 124/174 (71%), Gaps = 3/174 (2%)
Strand=Plus/Plus
Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873
||| || ||||| || || ||||| |||||||||| ||| ||| | || | | |
Sbjct 827313 AACGGCCGCTGCCATCGCCTATGGACTGGACAAGAGAGAGGGCGAGAAGAACATCCTCGT 827372
Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933
| || || | |||||||| || ||||||||||| || |||| ||||| ||| |
Sbjct 827373 GTTC---GACTTGGGTGGTGGAACTTTTGATGTCTCCCTGCTCACAATTGACAATGGAGT 827429
Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| ||||| ||||||| |||||| ||||| || ||||| ||||| || ||
Sbjct 827430 CTTTGAAGTTGTGGCTACTAATGGTGACACTCACCTGGGTGGAGAAGACTTTGA 827483
>seq10037
Length=433
Score = 86.0 bits (94), Expect = 8e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGA 196665
|| || |||||||||||||| | | || | ||||| ||| | | || || | || ||
Sbjct 109 CAGGTCTATGAAGGAGAACG-TGCAATGACTAAGGACAACAACTTGCTGGGCAAGTTTGA 167
Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725
|||| || ||||| |||| ||||||||||| || |||||| | || |||||||||
Sbjct 168 GCTGACCGGTATTCCCCCTGCCCCCAGAGGTGTACCTCAGATTGAAGTAACCTTCGATAT 227
Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785
|| || || || || || || || | |||| ||| ||| ||||||| | ||
Sbjct 228 CGATGCCAACGGCATCCTCAATGTGTCTGCTGTGGATAAGAGCACTGGCAAGGAGAACAA 287
Query 196786 GATTGTGATTACCAATGACAAGGG 196809
||| ||||| || ||||||||
Sbjct 288 GATCACAATTACAAACGACAAGGG 311
>seq1936
Length=84681
Score = 84.2 bits (92), Expect = 3e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 182940 TTTCCCCGAAGTGGAAAGACGCCGTAATGATCCCTTCCAACAACAGAGAGGCCAGCGACA 182999
|| || ||||| ||||| || ||||| | || || ||||| || ||| |||| ||||
Sbjct 50690 TTACCACGAAGGGGAAATACTCCGTATTTGTCTCTACCAACCACTCCGAGACCAGAGACA 50631
Query 183000 GCGAGTGTCTTTGCCGAGTCACCCTCTGTCACGATGAGTGTACA 183043
|| ||||| || || ||||| ||||| |||| ||||||||||||
Sbjct 50630 GCCAGTGTTTTGGCTGAGTCCCCCTCGGTCAGGATGAGTGTACA 50587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657739683992560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |