Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11] 14,923 sequences; 1,107,989,085 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq12 82.4 7e-11 >seq12 Length=7699506 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | ||||| || || || |||||||| ||| || |||| Sbjct 4631009 CGCAGCACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCA 4631068 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| || || |||||||| | ||||| | |||||||| || || ||||| || ||| Sbjct 4631069 TCTTCCAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGATCAGGGGGAATGCCCTCCTTG 4631128 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || || || | | || | ||||| |||| || || |||| || | Sbjct 4631129 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 4631188 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||||||||||| ||||| || || || ||||| Sbjct 4631189 GTCTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 4631223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488452868223600