Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq243 87.8 2e-12
>seq243
Length=25666195
Score = 87.8 bits (96), Expect = 2e-12
Identities = 124/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184
||||| ||||| || | || |||||| | ||| | ||||| |||| | | | |||||
Sbjct 20567591 AGCATATGGGGACCAACATGTGATGGCCTGGATCGTATTGTGGAGCGTTTTAATATGCCA 20567532
Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244
||| | ||||| || |||||| || | |||||||||||||| || || | || ||||
Sbjct 20567531 GAGTTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 20567473
Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295
|||| || || || || |||| | |||| || |||||||| || |||
Sbjct 20567472 AGCTTCTACTTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATATCA 20567421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463459131362640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |