Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq243 129 1e-24
>seq243
Length=25666195
Score = 129 bits (142), Expect = 1e-24
Identities = 125/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438
|||||||||||||| ||| | |||||||| || ||||| || |||||||| || |||||
Sbjct 1803639 GCATTATGGTGGTATTATGTCTCTAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 1803698
Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498
| ||||| || ||||| || | || || || ||||| ||||| ||||| || ||||||
Sbjct 1803699 TTGAGGAAGAAATTTAACCAAATCAGTTTCCTTCACGTCTATCACCATTTCACCATGTTT 1803758
Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|| || | ||| | |||||||| ||| |||| || || ||
Sbjct 1803759 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCCGGTGGCCA 1803799
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
|| ||||| || |||||| |||| || ||||| ||||| |||||||| | ||||||||
Sbjct 1805932 GCTTTTTTTGGAGCTCAGATGAACTCATTTATTCATGTCATTATGTACATGTATTATGGA 1805991
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
| || || ||||| | || ||| | || || | |||||||| || ||| | || |||
Sbjct 1805992 TTAGCTGCCTGTGGCCCTAAATTTCAGAAATACCTGTGGTGGAAACGATACTTGACCATA 1806051
Query 58661 ATGCAATTGGTA 58672
|||||||||||
Sbjct 1806052 TTGCAATTGGTA 1806063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903242679933280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |