Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11] 14,923 sequences; 1,107,989,085 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq243 82.4 6e-11 >seq243 Length=25666195 Score = 82.4 bits (90), Expect = 6e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 || || ||||| || |||||||| || || |||||||||| || || || ||||| || Sbjct 20271163 AATCCTTTTGACTTCATGGAAAACATCTCTCTGGAAGGCAAGACCAATTTCTTTGAGAAG 20271222 Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 || || || ||||||||||| ||||| |||||| Sbjct 20271223 CGAGTAGGTGAATATCAGCGGATGGGAGTCATG 20271255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397383713062615