Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq91 84.2 1e-11
>seq91
Length=4318309
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || ||||| || || || || ||||| ||||| ||||| |||
Sbjct 4012167 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 4012226
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | || || ||||| ||||| | || || |||||
Sbjct 4012227 GATACCATTGAGAATGTGAAGGC-CAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 4012285
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || || || ||||| || |||||||| | || ||| | || |||||
Sbjct 4012286 GCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACTCTGTCTGACTACAA 4012345
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || |||||
Sbjct 4012346 CATCCAGAAGGAATCCAC 4012363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337948124820884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |