Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coturnix_20japonica_20[refseq_20GCF_5F001577835.1_202016-03-01] 2,012 sequences; 927,656,957 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq253 84.2 3e-11 >seq253 Length=134823679 Score = 84.2 bits (92), Expect = 3e-11 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGG 65159 || || || |||||||| || || ||||| ||| || |||| |||| |||||||| |||| Sbjct 117709051 GTTGAAGGCATCTTCTTTTCGGGTTCATT-TGCTGCGATTTTTTGGCTGAAGAAGAGGGG 117709109 Query 65160 TCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGG 65209 || ||||| || || ||||| |||||||||||| | ||||||||| Sbjct 117709110 CCTGATGCCCGGATTAACTTTCTCCAATGAACTTATTAGCAGAGATGAGG 117709159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596554596274560