Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coturnix_20japonica_20[refseq_20GCF_5F001577835.1_202016-03-01] 2,012 sequences; 927,656,957 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq756 87.8 4e-12 >seq756 Length=11697260 Score = 87.8 bits (96), Expect = 4e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| ||||||||||| ||||| || |||| |||| || || ||||||||||| || || Sbjct 3815153 GATGTTATAATCAGACAATGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAACCT 3815094 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| || |||||||| || || || ||||| || || || || ||||| || | Sbjct 3815093 CTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGT 3815034 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || | ||| || || | || ||||| || || || | ||| || | || ||||| Sbjct 3815033 GTCACTGGGTTCCACCTCCAATGTGATGGTCTTCCCGGTCAGTGTCTTCACGAAGATCTG 3814974 Query 192534 CATTTT 192539 ||| || Sbjct 3814973 CATCTT 3814968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984454621336200