Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coturnix_20japonica_20[refseq_20GCF_5F001577835.1_202016-03-01] 2,012 sequences; 927,656,957 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq450 105 6e-18 >seq450 Length=100941466 Score = 105 bits (116), Expect = 6e-18 Identities = 128/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || |||||| ||||| | |||||| |||| ||| | ||||| Sbjct 88294430 AGCATATGGGGACCAACGTGTGATGGCCTAGATCGAATTGTTGAGCGTTGTAACATGCCA 88294371 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||||| ||||| || |||||| || | |||||||||||||| || || | || |||| Sbjct 88294370 GAGCTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 88294312 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 |||| || || || ||||||| | |||| || || ||||| || ||| Sbjct 88294311 AGCTTCTACTTTCAATGGCTTCCAGAGGCCAACAATACATTATGTGATGTCA 88294260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463533941828160