Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coturnix_20japonica_20[refseq_20GCF_5F001577835.1_202016-03-01] 2,012 sequences; 927,656,957 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq621 273 7e-68 seq785 197 4e-45 seq756 152 2e-31 seq769 143 8e-29 seq761 118 3e-21 seq450 84.2 7e-11 >seq621 Length=54019043 Score = 273 bits (302), Expect = 7e-68 Identities = 949/1461 (65%), Gaps = 35/1461 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| | || || || ||||| ||||| | ||| | || ||| Sbjct 48091158 GCCATCGGCATCGACCTGGGCACCACGTATTCCTGTGTGGGTGTCTTCCAGCATGGCAAA 48091099 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || || || || || ||| | || ||||| || || || |||||| Sbjct 48091098 GTGGAGATCATCGCCAACGACCAGGGAAACCGCACCACGCCCAGCTATGTGGCCTTTACC 48091039 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || || ||| |||| || || |||| || || || | || Sbjct 48091038 GATACGGAGCGTCTCATCGGGGATGCTGCCAAGAACCAAGTGGCCATGAACCCCACCAAC 48090979 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 || | |||||||| ||||| || || || | |||| | ||| | | || || Sbjct 48090978 ACCATCTTTGATGCCAAGCGTCTCATCGGCCGCAAGTAT----GACGACCCCACGGTGCA 48090923 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || || | || || | || || ||| || || || |||| || || | | Sbjct 48090922 GTCGGACATGAAGCACTGGCCCTTCCGTGTGGTG---AATGAGGGTGGCAAGCCCAAGGT 48090866 Query 349495 TGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553 | || || || ||||| || | || || || || || || || || || |||| Sbjct 48090865 GCAAGTGGAGTACAAAGGAGAGATGAAGACC-TTCTTCCCGGAGGAGATCAGCTCCATGG 48090807 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGA-TGCT 349612 | | || |||||||| |||||||| || || | || |||| || || || |||| Sbjct 48090806 TGCTCACCAAGATGAAGGAGATTGCTGAGGCCTACCTGGG-GAAAAAGGTACAGAATGCT 48090748 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 ||||| || || || || || || ||||| ||||||| || || ||||||||||| Sbjct 48090747 GTTATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGT 48090688 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 | ||| | || | || || | | || || || || ||||| ||||| || ||||| Sbjct 48090687 ACCATCACTGGCCTTAACGTGATGCGTATTATCAACGAGCCCACGGCTGCTGCTATTGCC 48090628 Query 349733 TATGGGCTTGATAAAATGAGTGACCA------AGaaaaaaaTATTCTTATTTTTGATTTA 349786 ||||| | || || | || || ||| || ||| | || || ||||| || Sbjct 48090627 TATGGCTTGGACAAGAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTG 48090568 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 || || || ||||||||||| || | || || | || || || || ||||| || || Sbjct 48090567 GGAGGGGGCACTTTTGATGTGTCCATTCTTACCATCGAGGATGGCATCTTTGAGGTGAAG 48090508 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCAT 349906 | || ||||| || || || || ||||| || || ||||| || ||| | || ||| Sbjct 48090507 TCCACAGCTGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACCGTATGGTGAACCAT 48090448 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAAT 349965 ||||| |||| || |||||| |||| || ||| |||| | ||| ||||| | Sbjct 48090447 TTTGTGGAAGAGTTCAAGCGT-AAGCACAAGCGTGACATTGCTGGCAATAAGCGAGCAGT 48090389 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAA 350024 | | || || | || || ||||| | || |||||| | || | | ||| | || ||| Sbjct 48090388 GAGGCGGCTGCGTACAGCTTGTGAGAGGGCGAAGCGTACTCTGAGC-TCTTCCACGCAAG 48090330 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTG 350084 || ||||| ||||| || || ||| |||| ||||||| | || || || |||| Sbjct 48090329 CCAGCATTGAGATTGACTCCCTCTTTGAGGGCATTGATTTCTACACCTCCATCACTCGTG 48090270 Query 350085 CTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAG 350144 | || ||||| || | | |||||||| | | || |||| || ||||| || | Sbjct 48090269 CCCGCTTTGAGGAGCTCAATGCTGATCTTTTCCGTGGTACCCTGGAGCCAGTGGAGAAGG 48090210 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 | |||||| || | || ||||| | || | || | || || || | Sbjct 48090209 CGCTGCGAGATGCCAAGCTCGATAAGGGCCAGATCCAGGAGATTGTGCTCGTGGGGGGCT 48090150 Query 350205 CTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CT 350263 | || |||||||| || | ||| |||| || || || || ||||||||||| | | Sbjct 48090149 CCACTCGTATTCCTAAGATCCAAAAGTTGCTGCAGGACTTCTTCAATGGCAAAGAGCTCA 48090090 Query 350264 TCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATT 350323 | ||| | || |||||||||||||| ||||| |||||||||||||| || ||| |||| Sbjct 48090089 ACAAGAGC-ATCAATCCAGATGAAGCAGTTGCTTATGGTGCTGCTGTGCAAGCAGCTATC 48090031 Query 350324 TTATCTGGAAATAAGAGTTCTAAAA---TTGATGATCTATTACTACTAGATGTAACTCCA 350380 | ||| | ||| ||| ||| | | ||||| | || | ||||| || || Sbjct 48090030 CTCATGGGAGACAAG---TCTGAAAACGTGCAAGATCTGCTCCTGTTGGATGTCACCCCC 48089974 Query 350381 CTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGT 350440 || || || || | || || |||||| ||| ||||| | ||| || | || | Sbjct 48089973 CTGTCCCTGGGCATCGAGACAGCTGGTGGAGTGATGACCGCTCTCATCAAGCGTAACACC 48089914 Query 350441 ACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAG-CCAGCGGT 350499 || | || || ||| | | || || || | || | |||| || ||| |||| || Sbjct 48089913 ACCATTCCCACCAAACAAACGCAGACCTTCACCACCTACTCAGACAACCAGAACAGC-GT 48089855 Query 350500 AACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGA 350559 | | || || | ||||||||| | ||| || || || || || || || | Sbjct 48089854 CCTAGTCCAGGTGTATGAAGGTGAGAGGGCTATGACAAAGGACAACAACTTGCTGGGCAA 48089795 Query 350560 ATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTT 350619 ||| ||||| | || || ||| || | ||||| |||||||| || ||| |||| Sbjct 48089794 GTTTGACCTAACGGGCATCCCCCCAGCACCCCGTGGAGTCCCTCAGATCGAGGTCACTTT 48089735 Query 350620 CGATATTGATTCAAATGGTAT 350640 |||||| ||| | |||||||| Sbjct 48089734 CGATATAGATGCTAATGGTAT 48089714 >seq785 Length=5496777 Score = 197 bits (218), Expect = 4e-45 Identities = 373/541 (69%), Gaps = 12/541 (2%) Strand=Plus/Plus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 |||||||||| || | || ||||| || |||||||| ||| | || || ||||||| | Sbjct 2582224 TTCTTATTTTCGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACTATTGAAGATG 2582283 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| || ||| | ||||| |||||||| || | ||||||||||||||||| | Sbjct 2582284 GCATCTTTGAGGTGAAATCCACTGCAGGTGATACTCACTTGGGTGGAGAAGATTTTGACA 2582343 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGA 349948 | || | || || || || ||||| || || ||||| || | || || | Sbjct 2582344 ACCGCATGGTCAACCACTTCATTGCTGAATTCAAACG-CAAGCACAAGAAAGACATCAGT 2582402 Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008 || || |||||| | |||||||| | ||||| ||||||||||| |||||| || | Sbjct 2582403 GAGAACAAGAGAGCAGTTCGTCGCCTCCGTACTGCATGTGAACGTGCAAAGCGTACCCTG 2582462 Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068 || || | || ||| || ||||||||| |||||||| ||| || | || |||| Sbjct 2582463 TCGTCGAGCACACAAGCCAGTATTGAAATCGATTCTCTCTATGAGGGTATTGACTTCTAC 2582522 Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAA 350126 |||| || || | ||||| |||||||| || ||| || || || | | || Sbjct 2582523 ACATCCATCACGAGAGCTCGCTTTGAAGA--GCTGAATGCTGACCTGTTCCGTGGCACCC 2582580 Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186 | ||||||||||| || | | | ||||| || || ||| ||||| | || Sbjct 2582581 TTGATCCTGTGGAGAAGGCCCTGAGGGATGCCAAGCTGGACAAGTCACAGATCCACGACA 2582640 Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246 | || | ||||| |||||||| || || ||||| |||| | | || || || | Sbjct 2582641 TTGTGCTGGTTGGGGGTTCTACCCGCATCCCAAAGATTCAGAAACTGCTGCAAGACTTCT 2582700 Query 350247 TTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303 | ||||||||||| || | ||| | || ||||| |||||||| || || ||||||| Sbjct 2582701 TCAATGGCAAAGA--GTTGAACAAGAGC-ATCAATCCTGATGAAGCCGTGGCTTATGGTG 2582757 Query 350304 C 350304 | Sbjct 2582758 C 2582758 Score = 147 bits (162), Expect = 7e-30 Identities = 350/523 (67%), Gaps = 6/523 (1%) Strand=Plus/Minus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTA 183320 |||||||||| || || |||||||| || || || | | | | || ||||||||||| Sbjct 2582760 CTGCACCATAAGCCACGGCTTCATCAGGATTGAT-GCTCTTGTTCAACTCTTTGCCATTG 2582702 Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380 || || ||| |||| || ||||| ||||| || | || ||||| || || | || Sbjct 2582701 AAGAAGTCTTGCAGCAGTTTCTGAATCTTTGGGATGCGGGTAGAACCCCCAACCAGCACA 2582642 Query 183381 ACTTCATCGATATT--ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGT 183438 | || | ||| | |||| | | | ||| | ||| | | | || || ||||| | Sbjct 2582641 ATGTCGTGGATCTGTGACTTGTCC-AGCTTG-GCATCCCTCAGGGCCTTCTCCACAGGAT 2582584 Query 183439 CCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATG 183498 | | || | || | || | | |||||| || | ||||| || | |||| Sbjct 2582583 CAAGGGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTCGTGATGGATG 2582524 Query 183499 aaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATG 183558 | ||||||||||| | ||| | ||||| |||||||| | |||||| || | Sbjct 2582523 TGTAGAAGTCAATACCCTCATAGAGAGAATCGATTTCAATACTGGCTTGTGTGCTCGACG 2582464 Query 183559 ATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTAT 183618 | | || | || || ||||||||||| || | || ||||| | || ||| || | Sbjct 2582463 ACAGGGTACGCTTTGCACGTTCACATGCAGTACGGAGGCGACGAACTGCTCTCTTGTTCT 2582404 Query 183619 CTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTG 183678 | | || |||| || || || | ||| ||||||| ||| || || | | | | Sbjct 2582403 CACTGATGTCTTTCTTGTGCTTGCGTTTGAATTCAGCAATGAAGTGGTTGACCATGCGGT 2582344 Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738 | ||||||||||| ||||| || || ||||| || ||||| | ||| || ||||| || | Sbjct 2582343 TGTCAAAATCTTCTCCACCCAAGTGAGTATCACCTGCAGTGGATTTCACCTCAAAGATGC 2582284 Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACC 183781 | ||||||||| | | |||||| |||||||| || ||||| || Sbjct 2582283 CATCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCC 2582241 Score = 129 bits (142), Expect = 2e-24 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || |||||| ||||||| | ||||||||||||||||||||||| ||||||| || Sbjct 2581960 ACTGTAACTAATGCTGTAGTCACTGTACCAGCCTATTTTAATGACTCCCAGCGCCAGGCC 2582019 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 |||||||||||||| | |||||| ||| | ||||| || |||| || ||||| || || Sbjct 2582020 ACAAAAGATGCTGGAACCATTGCAGGGCTTAATGTACTGCGAATCATCAATGAGCCAACA 2582079 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAA 349746 ||||| || || || ||||| || ||||| Sbjct 2582080 GCTGCTGCTATAGCCTATGGTCTGGATAA 2582108 >seq756 Length=11697260 Score = 152 bits (168), Expect = 2e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || ||||||||||| ||||| ||||||||| Sbjct 3815182 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTATAATCAGACAATGTGCGCCCATCT 3815123 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| | | ||||| ||||| || || || || |||||| Sbjct 3815122 TCCAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGTGGGATGCCCTCCTTATCC 3815063 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| || || | ||| ||||| || || | ||| | ||| Sbjct 3815062 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGTTCCACCTCCAATGTGATGGTC 3815003 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| ||||| || || || |||||||| Sbjct 3815002 TTCCCGGTCAGTGTCTTCACGAAGATCTGCAT 3814971 Score = 122 bits (134), Expect = 3e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || ||||| || || | ||| ||||||||| Sbjct 3815410 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGCCCATCT 3815351 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || |||||||| ||||| ||||| || | || || ||||| || || || || || ||| Sbjct 3815350 TCCAGTTGTTTGCCAGCGAAGATCAGCCTCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 3815291 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | || |||||||| || | || | || Sbjct 3815290 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGTTCAACCTCCAAGGTGATGGTT 3815231 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || ||||| |||||||| Sbjct 3815230 TTACCTGTCAAGGTCTTCACAAAGATCTGCAT 3815199 Score = 122 bits (134), Expect = 3e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || || || | ||| ||||||||| Sbjct 3815638 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGCCCATCT 3815579 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| | | || || |||||||| ||||| || || ||| Sbjct 3815578 TCCAGCTGCTTCCCAGCAAAGATCAACCTCTGTTGGTCAGGAGGGATTCCCTCCTTGTCC 3815519 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| |||||||| || | || | || Sbjct 3815518 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGTTCAACCTCCAAGGTGATGGTT 3815459 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || || |||||||| Sbjct 3815458 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 3815427 >seq769 Length=8760791 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || ||||| |||||||| ||||| || || ||||| | || ||||| ||| Sbjct 5350545 AGCACCAGGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGCCCGTCT 5350486 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | |||||||| |||||||| ||||| || || Sbjct 5350485 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCCTTGTCT 5350426 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| || || | ||| || ||||| ||||| || | ||| Sbjct 5350425 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTC 5350366 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 5350365 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 5350334 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || ||||| | || ||||| ||| Sbjct 5350773 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 5350714 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| | | |||||||| |||||||| |||||||||||| Sbjct 5350713 TCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCC 5350654 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| ||||| || | ||| Sbjct 5350653 TGGATCTTGGCCTTCACATTCTCAATGGTATCGCTGGGCTCAACCTCAAGGGTGATGGTC 5350594 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || || ||||| |||||||| Sbjct 5350593 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 5350562 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || |||||||| || || || || ||||| | || ||||||||| Sbjct 5351001 AGCACAAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 5350942 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||||| || | |||||||| |||||||| || ||||| || Sbjct 5350941 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGAATGCCCTCTTTGTCT 5350882 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || || || | ||| |||||||| ||||| || | ||| Sbjct 5350881 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGTTCAACCTCAAGGGTGATGGTC 5350822 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| || || |||||||| Sbjct 5350821 TTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 5350790 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || ||||| | || ||||| ||| Sbjct 5351229 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 5351170 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||||||||||||||| |||||||| || Sbjct 5351169 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCTTTGTCT 5351110 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || || || | ||| || ||||| ||||| || | ||| Sbjct 5351109 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTC 5351050 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 5351049 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 5351018 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || ||||| | || ||||||||| Sbjct 5351685 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 5351626 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | |||||||| |||||||| |||||||| || Sbjct 5351625 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCT 5351566 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| ||||| || | ||| Sbjct 5351565 TGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTC 5351506 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 5351505 TTACCAGTGAGGGTCTTCACAAAGATCTGCAT 5351474 >seq761 Length=8971062 Score = 118 bits (130), Expect = 3e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| ||||| | |||||||||||||| || || || ||| | ||||| | | Sbjct 8081103 ATTGATGAGATAGTTCTTGTTGGTGGTTCTACTCGCATCCCCAAAATACAACAACTTGTT 8081044 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 |||||||| ||||| ||||| |||||| | |||||||||||||| ||||| || Sbjct 8081043 AAGGAGTTTTTCAATGGGAAAGAGCCTTCTCGTGGCATTAATCCAGATGAGGCTGTAGCC 8080984 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 |||||||| ||||||||||| Sbjct 8080983 TATGGTGCAGCTGTTCAGGC 8080964 Score = 111 bits (122), Expect = 5e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| ||||||||||||||||| || ||||| |||||||| ||||| |||||| | Sbjct 8080962 CAGCCTGAACAGCTGCACCATAGGCTACAGCCTCATCTGGATTAATGCCACGAGAAGGCT 8081021 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 |||| ||||| ||||| || || | |||||| ||||| || || | ||| ||||||| Sbjct 8081022 CTTTCCCATTGAAAAACTCCTTAACAAGTTGTTGTATTTTGGGGATGCGAGTAGAACCAC 8081081 Query 183370 CGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTT 183429 | || | |||| ||||| |||| | || | | | || |||| | |||||| | Sbjct 8081082 CAACAAGAACTATCTCATCAATATCAGACTTCTTTAGGTCAGAGTCTTCCAGAACTTTCT 8081141 Query 183430 CAACAGGGTCCATAGT 183445 |||||| | ||| || Sbjct 8081142 GAACAGGCTTCATTGT 8081157 Score = 104 bits (114), Expect = 7e-17 Identities = 127/173 (73%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 |||||||| || ||||||||||| | || || ||| || || || || || || Sbjct 8081882 ACTGCTGCTGCTATTGCATATGGATTGGACAA---GAGAGAGGGTGAGAAGAACATCCTC 8081826 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| | |||||||| ||||||||||| || || || ||| |||| | ||| | Sbjct 8081825 GTGTTTGACCTGGGTGGTGGAACTTTTGATGTCTCCCTGCTGACAATTGACAATGGAGTC 8081766 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||||||||| || || |||||| ||||| || ||||||||||| ||||| Sbjct 8081765 TTTGAAGTTGTGGCTACCAATGGTGACACACACCTGGGTGGAGAAGACTTTGA 8081713 >seq450 Length=100941466 Score = 84.2 bits (92), Expect = 7e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 223722 CCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTT 223781 |||||||||| || | ||||| ||||| || | |||||||||||||||||| || | Sbjct 88063154 CCTCATCTCTACTGATGAGCTCATTAGAAAAAGTGAGTCCAGGCATTAAACCTCTTTTCT 88063095 Query 223782 TCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACG 223841 ||| |||||| || | ||||| || ||||| || || ||||| || ||||| | Sbjct 88063094 TCAGCCAAAAAATGGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAATG 88063035 Query 223842 CTACTA 223847 |||||| Sbjct 88063034 CTACTA 88063029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515215338635636