Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cuculus_20canorus_20[refseq_20GCF_5F000709325.1_202014-06-17] 14,930 sequences; 1,153,894,225 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq486 87.8 2e-12 >seq486 Length=3991569 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||||||||| || | ||| || ||||| |||||||| | || || | |||||||| | Sbjct 1142850 CACCATAAGGCGATCTTGGGTAAAAAGGGGTGGTCTCCTTTTGCGGGATTTCTTGCACTT 1142909 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | ||| |||||||||||||||| ||||| |||| Sbjct 1142910 TTCCAAAAAGTTCACTGGTGGAGGCTTGGTAGA 1142942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665370202107600