Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cuculus_20canorus_20[refseq_20GCF_5F000709325.1_202014-06-17] 14,930 sequences; 1,153,894,225 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2422 369 5e-97 seq725 178 2e-39 seq1378 174 2e-38 seq1268 116 5e-21 seq14921 100 4e-16 seq1383 95.1 2e-14 seq3278 84.2 3e-11 >seq2422 Length=3842822 Score = 369 bits (408), Expect = 5e-97 Identities = 1038/1580 (66%), Gaps = 29/1580 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || ||||| | || ||| Sbjct 2607662 GCGATCGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGTGTCTTCCAGCATGGCAAA 2607721 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || ||||| || ||||| || || || ||||| ||||| || Sbjct 2607722 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACGCCCAGCTACGTGGCCTTCACC 2607781 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || ||| | || ||||| || || || ||| || |||||||| | |||| Sbjct 2607782 GACACCGAGCGCCTCATCGGGGATGCTGCCAAGAACCAGGTGGCGATGAACCCCACCAAT 2607841 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||||||||| ||||| || || || ||||||| ||| | || || Sbjct 2607842 ACCATCTTTGACGCCAAGCGCCTCATCGGCCGCAAGTACGATGATCCCACGGTGCAGTCG 2607901 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | || || | | | || | ||||| | | | | Sbjct 2607902 GACATGAAGCACTGGCCGTTCCGTGTGGT---CAGCGAGGGCGGCAAGCCCAAGGTGCAG 2607958 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCG-TCTATGGTGTT 195657 || || | | | || |||| ||| | || ||||| || | | | || |||||| | Sbjct 2607959 GTGGAGTATAAGGGCGAGATTAAA-ACCTTCTTCCCGGAGGAGATCAGCTCCATGGTGCT 2608017 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 || ||||||||||||| || || ||| | |||| | ||| | |||| || | Sbjct 2608018 GACGAAGATGAAGGAGATCGCCGAGGCTTACCTGGGGTGCAAGGTGCAGAATGCTGTCAT 2608077 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || ||||||||||||| ||| || || || ||||| ||||| ||||||| | || Sbjct 2608078 CACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACAAAAGACGCTGGCACCAT 2608137 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 | || || ||| | | |||||||| || || ||||| ||||| || || ||||| Sbjct 2608138 CACTGGCCTCAACGTGATGCGTATTATCAACGAGCCCACAGCAGCTGCCATCGCCTATGG 2608197 Query 195838 TCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||||||||| | || | || || || || | |||||||| | || || Sbjct 2608198 CTTGGACAAGAAAGGTACCCGGGCTGGGGAGAAGAACGTGCTCATCTTTGACTTGGGAGG 2608257 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 || || || ||||| || | || | ||||| | ||| || || || || ||| | || Sbjct 2608258 GGGCACTTTCGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCCAC 2608317 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGT 196010 |||||||| || || || ||||| || || || || ||| | | || ||||| Sbjct 2608318 AGCTGGTGACACCCACCTGGGTGGAGAGGACTTTGACAACCGTATGGTGAACCACTTTGT 2608377 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || || ||| || ||| | ||| || ||| |||| || | || | | | Sbjct 2608378 G-GAAGAATTCAAGCGCAAGCACAAGCGCGACATTGCTGGCAACAAGCGAGCAGTGAGGC 2608436 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCT---CTCTTCTACGGCTCAAACAA 196127 | || | || || ||||| | || || || ||||| |||||| ||| ||| | | Sbjct 2608437 GACTGCGTACGGCTTGTGAGAGGGCAAAGCGCACTCTTAGCTCTTCCACG---CAAGCTA 2608493 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 ||||||| || || | | || || ||||||||||| || | ||||| ||||| | Sbjct 2608494 GCATTGAGATCGACTCCCTCTACGAGGGCATTGACTTCTACACTTCCATTACTCGTGCCC 2608553 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | || || ||| | || | ||| | || | | |||| ||||| || | | | Sbjct 2608554 GCTTCGAGGAGCTCAATGCCGATCTCTTCCGTGGCACTCTGGAGCCTGTGGAGAAGGCCC 2608613 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | ||||| || ||| | || ||| || | | || ||||| || ||||| || || | Sbjct 2608614 TGCGTGATGCCAAGCTAGACAAGGGCCAGATCCAGGAGATTGTGCTGGTGGGTGGCTCTA 2608673 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 ||||||| || ||||| ||| || |||| |||||||||| |||||| | |||| Sbjct 2608674 CCCGTATCCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGTAAAGAGCTTAACA 2608733 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | | |||||||| |||||||| ||||| || ||||| || || ||||| || || || Sbjct 2608734 AGAGCATCAACCCTGATGAAGCTGTTGCCTACGGTGCAGCTGTGCAGGCAGCCAT--CCT 2608791 Query 196428 CAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 || | | ||||| | | ||||| || ||||| ||||| | ||||| | || | | Sbjct 2608792 CATG-GGAGACAAGTCTGAGAACGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCTGT 2608850 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 ||||||| | || || || ||||| || ||||| | || | | ||||| || | Sbjct 2608851 CCCTGGGCATCGAGACGGCTGGTGGAGTGATGACCGCTCTCATCAAGCGCAACACCACCA 2608910 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAG-GTGTTCA 196602 |||| || || | || ||| | || || || || || || | ||| ||| || Sbjct 2608911 TTCCCACCAAACAAACTCAGACCTTCACCACCTACTCAGACAACCAGAGCAGCGTGCTC- 2608969 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTT 196662 | || ||||| || || || | || | ||||| ||| | | || || | || Sbjct 2608970 -GTCCAGGTATACGAGGGTGAGAGGGCCATGACGAAGGACAACAACTTGCTGGGCAAGTT 2609028 Query 196663 CGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGA 196722 || | ||||| || || | |||||| | || || || |||||| | || || || Sbjct 2609029 TGACCTAACGGGCATCCCCCCAGCACCCCGTGGGGTCCCCCAGATTGAAGTCACTTTTGA 2609088 Query 196723 TATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGA 196782 || || || ||||| || || ||||||| || | ||||||| | || || | Sbjct 2609089 CATTGATGCCAATGGTATCCTGAACGTCAGCGCCGTGGACAAGAGCACCGGTAAGGAGAA 2609148 Query 196783 AAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842 || || || |||||||||||||| || ||| ||||| || ||||| |||||||| Sbjct 2609149 CAAAATCACTATCACCAATGACAAGGGTCGCCTTAGCAAGGATGACATTGACCGTATGGT 2609208 Query 196843 TCAAGATGCGGAAAAGTACA 196862 ||||| ||||| ||||||| Sbjct 2609209 GCAAGAAGCGGAGAAGTACA 2609228 >seq725 Length=5509020 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||| | || || || || |||||||| || || || | Sbjct 5362317 ATGCAGATCTTTGTGAAGACCTTGACAGGCAAGACCATCACCCTGGAAGTCGAACCCAGT 5362376 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| || ||||||||||||||||| || |||||| Sbjct 5362377 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCAGATCAG 5362436 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || |||||| |||| |||||| Sbjct 5362437 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAAC 5362496 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| || ||||| || ||||| || | || |||||||| Sbjct 5362497 ATCCAGAAGGAATCCACTCTGCATCTTGTGCTGCGCCTGAGGGGTGGT 5362544 Score = 176 bits (194), Expect = 6e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||| | Sbjct 5361861 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAAGTTGAGCCCAGT 5361920 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || ||||||||||||||||| || |||||| Sbjct 5361921 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCAGATCAG 5361980 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || ||||| |||| |||||| Sbjct 5361981 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACCCTTTCTGACTACAAC 5362040 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || ||| | || ||||| || Sbjct 5362041 ATCCAGAAGGAATCCACTTTGCATCTTGTGCT 5362072 Score = 167 bits (184), Expect = 3e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||| | || || || || |||||||| || |||||| | Sbjct 5362089 ATGCAGATCTTTGTGAAGACCTTGACAGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 5362148 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || ||||||||||||||||| |||||||| Sbjct 5362149 GACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGATCAA 5362208 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || |||||| |||| |||||| Sbjct 5362209 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAAC 5362268 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || ||| | || ||||| || Sbjct 5362269 ATCCAGAAGGAATCCACTTTGCATCTTGTGCT 5362300 >seq1378 Length=1736952 Score = 174 bits (192), Expect = 2e-38 Identities = 168/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||| |||||||| ||| | Sbjct 707284 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTGGAGCCCAGT 707343 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || |||||||| || || |||||||||||||| ||||||||| Sbjct 707344 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGATCAG 707403 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| ||||| || || ||||| |||| |||||| Sbjct 707404 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 707463 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGG 172077 | || ||||| || || || ||| || ||| ||| Sbjct 707464 ATCCAGAAGGAATCCACCCTCCACATTTCTCTGAGG 707499 Score = 167 bits (184), Expect = 3e-36 Identities = 178/234 (76%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || |||||||| |||||||| ||| | Sbjct 707514 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACTCTCGAGGTGGAGCCCAGT 707573 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||||| || || ||||| || || || || || ||| Sbjct 707574 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCTGACCAG 707633 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || ||||| || || ||||| ||||||||||| ||| | ||||||||||| Sbjct 707634 CAGAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGATGGACGCACCTTGTCTGATTACAAC 707693 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 | || ||||| || || || |||||||| || | || || ||||| ||||| Sbjct 707694 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTGCGCCTGCGTGGTGGCATGCAA 707747 Score = 149 bits (164), Expect = 8e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||||||||| ||||| || || || || |||||||| ||||| || | Sbjct 707742 ATGCAAATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTGGAACCCAGT 707801 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || ||||| || || || || || ||| Sbjct 707802 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCTGACCAG 707861 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || ||||| | || |||||| Sbjct 707862 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 707921 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || |||||||| || | || || ||||| Sbjct 707922 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTGCGCCTGCGTGGTGG 707968 Score = 149 bits (164), Expect = 8e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||| || ||||| || | Sbjct 707970 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTGGAACCCAGT 708029 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||||| || || ||||| || || || || || ||| Sbjct 708030 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCCCCTGACCAG 708089 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || ||||| | || |||||| Sbjct 708090 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 708149 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || |||||||| || | || || ||||| Sbjct 708150 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTGCGCCTGCGTGGTGG 708196 >seq1268 Length=965101 Score = 116 bits (128), Expect = 5e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || ||||||||||| || || |||| || ||||| || ||||| ||||| || | Sbjct 654846 ATGCCGTAGTGACTGTACCGGCCTATTTCAACGACTCACAGCGCCAGGCTACAAAAGATG 654787 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827 ||| | ||||| || || ||| || |||| |||||||| |||||||| ||||||| Sbjct 654786 CTGGAACCATTGCAGGGCTGAACGTCCTGCGAATCATCAATGAGCCAACAGCTGCTGCAA 654727 Query 195828 TTGCTTATGGTCTGGACAAGAA 195849 | || |||||||||||||| || Sbjct 654726 TAGCCTATGGTCTGGACAAAAA 654705 Score = 91.5 bits (100), Expect = 2e-13 Identities = 155/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 196594 AGGTGTTC-ATATTC--AAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATC 196649 ||||||| || ||| | || |||||||||||||| | || || | ||||| ||| | Sbjct 653268 AGGTGTTTTATCTTCCTAGGTGTATGAAGGAGAACG-TGCCATGACTAAGGACAACAACT 653210 Query 196650 TACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTA 196709 | || || | || || |||| || ||||| |||| |||||||||||||| |||||| Sbjct 653209 TGCTGGGCAAGTTTGAGCTGACTGGTATTCCTCCTGCTCCCAGAGGTGTTCCTCAGATTG 653150 Query 196710 ATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTT 196769 | || || ||||| || || ||||| || || || || | |||| ||| ||| Sbjct 653149 AAGTAACGTTTGATATTGATGCCAATGGCATCCTGAATGTTTCTGCTGTGGATAAGAGCA 653090 Query 196770 CTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGG 196809 ||||||| | ||||| || || ||||||||||| Sbjct 653089 CTGGCAAGGAGAACAAGATCACAATAACAAATGACAAGGG 653050 >seq14921 Length=9872375 Score = 100 bits (110), Expect = 4e-16 Identities = 129/174 (74%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 ||| || ||||| ||||| ||||| ||||||||| ||| ||| || || || || Sbjct 8873617 AACGGCTGCTGCCATTGCATATGGATTGGACAAGAGAGAGGGCGA-GAAGAACATCC-TT 8873560 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 | | |||||| | |||||||| || ||||||||||| || |||| ||||| ||| | Sbjct 8873559 G-TGTTTGATTTGGGTGGTGGCACCTTTGATGTCTCCCTCCTCACCATTGACAATGGAGT 8873501 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| |||||| |||||| |||||||| ||||| ||||| || || Sbjct 8873500 CTTTGAAGTTGTGGCTACCAATGGTGACACTCATCTGGGTGGAGAAGACTTTGA 8873447 >seq1383 Length=196733 Score = 95.1 bits (104), Expect = 2e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||||||||| || |||||||| || || ||||||||||| ||||||||||||||||| || Sbjct 189945 AGGCATTCCTCCTGATCAGCAGCGGCTGATTTTTGCTGGAAAACAGCTTGAAGATGGGCG 189886 Query 172023 TACCCTCGCTGATTACAACGTTCAAAA 172049 || || |||| || ||| ||||||| Sbjct 189885 CACGCTGTCTGACTATAACATTCAAAA 189859 >seq3278 Length=1645786 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || ||||| |||||| | ||||| ||| | Sbjct 1495096 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAAACCATCACCTTGGAGGTGGAGCCCAAT 1495037 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| || || ||| |||| |||||||| || ||||| ||||| Sbjct 1495036 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGG 1494993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657739626429600