Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq11789 127 2e-24 >seq11789 Length=4909933 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | |||||||||||||| || ||| || ||||| || || ||| || Sbjct 837687 AGATATTTCTCTGATGGCTTTGCCTCCGTGCCATGCCCTTTGCCAGTTCTATGTTCTAAA 837628 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||||||||| || ||| | ||||| || || | ||||||||||| || || ||||| Sbjct 837627 TGGTGAATTGTCTTGCCAACTCTATCAGCGGTCTGGAGATATGGGACTAGGAGTGCCTTT 837568 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||||||||| || ||| | ||||| || || |||||||| ||||| |||| Sbjct 837567 CAATATTGCCAGCTATTCACTGCTCACATACATGATTGCCCATGTCACAG 837518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399126636136495