Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq737 82.4 8e-11 >seq737 Length=313774 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 153677 ATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTT-TGAT 153735 ||||| |||||||| | ||||| ||||||||||| || | || || | || || | Sbjct 289359 ATATTCCACTATTTCTGTACACAGGTTGCTGCATTTGATG-GTCCCCAGGTTCTGCTGGT 289417 Query 153736 TGCTTTTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAA 153795 |||| || | ||| |||| ||| ||||| |||||||| ||||||||||| || | ||| Sbjct 289418 TGCTCTTCCTGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCCGTCTGAG 289477 Query 153796 TTTCTATAATAG 153807 ||| || |||| Sbjct 289478 ATTCAATGATAG 289489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495990886367200