Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq737 87.8 2e-12 >seq737 Length=313774 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 157099 ATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGAT 157157 ||||| |||||||| | ||||| ||||||||||| || ||| || | || || | Sbjct 289359 ATATTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGG-TCCCCAGGTTCTGCTGGT 289417 Query 157158 TGCTTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAA 157217 |||| || | |||||||| ||| ||||| | |||||||||||||||||| || | ||| Sbjct 289418 TGCTCTTCCTGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCCGTCTGAG 289477 Query 157218 TTTCTATGAT 157227 ||| ||||| Sbjct 289478 ATTCAATGAT 289487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506939672415120