Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1467 84.2 3e-11 >seq1467 Length=440427 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| || ||| | ||||| ||| | | |||||||||| || || ||||||||| Sbjct 203773 TAGGCTGCAAGCATGTGAAAGGCATTCTCCTGTATGGACCTCCAGGCTGTGGTAAAACAC 203832 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATG 164617 | ||||| || |||| |||| | | ||| | || || || | || |||| Sbjct 203833 TTATGGCGAGACAGATTGG-CAAGATGCTGAATGCCAGAGAACCA--AAGGTGGTCAATG 203889 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 |||| ||| | | || |||||||| ||||| ||||| || || | | ||| ||||| Sbjct 203890 GTCCAGAAATCCTCAATAAATATGTGGGTGAATCAGAGGCCAACATCCGCAAGCTGTTTG 203949 Query 164678 AGGAGGCTGAAGAAGAACAAA 164698 || || ||||||||||||| Sbjct 203950 CTGATGCAGAAGAAGAACAAA 203970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595784175915600