Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2186 93.3 4e-14 >seq2186 Length=3828881 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || || || || || | || || || || |||| || || || || | Sbjct 2468285 AAAAATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTTGAGCC 2468226 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || |||| || || || ||||||||||| ||||| || || Sbjct 2468225 CAGTGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGA 2468166 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || | || || ||||| ||||| | | | || ||| |||||| | || || || Sbjct 2468165 GCAGCAGAGGCTGATCTTTGCTGGCAAGCCGCTGGAAGATGGGCGCACCCTGTCTGACTA 2468106 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||| || || ||||||||| | || || || |||| Sbjct 2468105 CAACATCCAGAAGGAATCCACCCTGCACTTGGTCCTGCG 2468067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419667683905915