Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq673 87.8 2e-12 seq737 82.4 8e-11 >seq673 Length=3179169 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 138385 CAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCG 138444 ||||| || | || |||| || | ||| | | |||||||| |||||||||||||| Sbjct 2476467 CAGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCA 2476526 Query 138445 CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 || | ||| ||| || || || || |||| | ||| || | ||| ||||| || Sbjct 2476527 GACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGG 2476586 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 || |||||||| ||||| ||| || || | | || | |||||| | ||| Sbjct 2476587 GGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTCA 2476646 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || | || || ||||||||||| | ||||| ||||||||| Sbjct 2476647 ACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCATG 2476697 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| || | ||| ||| || || || || |||| | Sbjct 2476731 GACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCA 2476790 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 ||| || | ||| ||||| || || |||||||| ||||| ||| || || | Sbjct 2476791 AAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACA 2476850 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | || | || || ||||||||||| | Sbjct 2476851 TTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTC 2476910 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 2476911 ACAAAGATCTGCATG 2476925 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| || | ||| ||| || || || || |||| | Sbjct 2476959 GACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCA 2477018 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 ||| || | ||| ||||| || || |||||||| ||||| ||| || || | Sbjct 2477019 AAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACA 2477078 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | || | || || ||||||||||| | Sbjct 2477079 TTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTC 2477138 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 2477139 ACAAAGATCTGCATG 2477153 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| || | ||| ||| || || || || |||| | Sbjct 2477187 GACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCA 2477246 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 ||| || | ||| ||||| || || |||||||| ||||| ||| || || | Sbjct 2477247 AAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACA 2477306 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | || | || || ||||||||||| | Sbjct 2477307 TTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTC 2477366 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 2477367 ACAAAGATCTGCATG 2477381 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| || | ||| ||| || || || || |||| | Sbjct 2477415 GACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCA 2477474 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 ||| || | ||| ||||| || || |||||||| ||||| ||| || || | Sbjct 2477475 AAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACA 2477534 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | || | || || |||||||| || || Sbjct 2477535 TTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTC 2477594 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 2477595 ACAAAGATCTGCATG 2477609 >seq737 Length=313774 Score = 82.4 bits (90), Expect = 8e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 153647 CACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTT 153706 ||| || || | || |||||||||||||| ||| |||| || ||||| ||||| || Sbjct 289365 CACTATTTCTGTACACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGGTTGCTCTT 289424 Query 153707 GCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751 | ||||| | ||||||| | |||||||||||| ||||||||| Sbjct 289425 CCTGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTC 289469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496189257125520