Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2186 131 2e-25 seq673 111 2e-19 >seq2186 Length=3828881 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| |||| |||| || ||||| ||||| |||||||| | Sbjct 2468053 TGCCACCCCTCAGGCGCAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 2468112 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || |||||| | || || ||| ||||||| || || |||| | |||||| || | | Sbjct 2468113 ACAGGGTGCGCCCATCTTCCAGCGGCTTGCCAGCAAAGATCAGCCTCTGCTGCTCTGGGG 2468172 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| || | | ||||| || | || | Sbjct 2468173 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 2468232 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 | |||| |||||||| ||||||||||| || || || ||||| |||||||| Sbjct 2468233 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATTTT 2468284 Score = 129 bits (142), Expect = 7e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| || || |||||| | || || ||||||||||| || || Sbjct 2467721 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 2467780 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | |||||| || | || | || ||||||||| |||||| ||||| || Sbjct 2467781 ATCAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 2467840 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || | || || |||| |||||||| ||||||||||| || || || Sbjct 2467841 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 2467900 Query 46583 AAGATTTGCATTTT 46596 ||||| |||||||| Sbjct 2467901 AAGATCTGCATTTT 2467914 >seq673 Length=3179169 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||| ||||| | | |||||| || || |||||||| | Sbjct 2477380 TGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAG 2477439 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || | |||| |||| || |||||||||||||| || | || | ||||||||| | | Sbjct 2477440 ACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGG 2477499 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||| | || | | ||||| | | || | Sbjct 2477500 GAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTCAA 2477559 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 | || | || ||||| ||||| ||||| || || |||||||| ||||| ||| || Sbjct 2477560 CCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTGAAC 2477615 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||| ||||| | | |||||| || || |||||||| | Sbjct 2476696 TGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAG 2476755 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || | |||| |||| || |||||||||||||| || | || | ||||||||| | | Sbjct 2476756 ACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGG 2476815 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||| | || | | ||||| | | || | Sbjct 2476816 GAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTCAA 2476875 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | || ||||| ||||| ||||| || | |||||||| ||||| Sbjct 2476876 CCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCAT 2476924 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||| ||||| | | |||||| || || |||||||| | Sbjct 2476924 TGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAG 2476983 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || | |||| |||| || |||||||||||||| || | || | ||||||||| | | Sbjct 2476984 ACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGG 2477043 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||| | || | | ||||| | | || | Sbjct 2477044 GAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTCAA 2477103 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | || ||||| ||||| ||||| || | |||||||| ||||| Sbjct 2477104 CCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCAT 2477152 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||| ||||| | | |||||| || || |||||||| | Sbjct 2477152 TGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAG 2477211 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || | |||| |||| || |||||||||||||| || | || | ||||||||| | | Sbjct 2477212 ACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGG 2477271 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||| | || | | ||||| | | || | Sbjct 2477272 GAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTCAA 2477331 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | || ||||| ||||| ||||| || | |||||||| ||||| Sbjct 2477332 CCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCAT 2477380 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | |||| ||| ||||| | | |||||| || || |||||||| || Sbjct 2476469 GCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAGA 2476528 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || | |||| |||| || |||||||||||||| || | || | ||||||||| | || Sbjct 2476529 CAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGGG 2476588 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | ||||||||| |||||| ||| | || | | ||||| | | || || Sbjct 2476589 AATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTCAAC 2476648 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || ||||| ||||| ||||| || | |||||||| ||||| Sbjct 2476649 CTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCAT 2476696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565155090925320