Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq737 87.8 2e-12 >seq737 Length=313774 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | ||||| | | ||||| || ||||| || ||||| || ||||| ||||||||| Sbjct 289496 TGGTACGCTATCATTGAATCTCAGACGGAGACCGGCACACCGTACATGCTGTACAAAGAC 289437 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 | || ||| ||||| || || |||| |||| ||||| | |||||| ||| Sbjct 289436 TCTTGCAACAGGAAGAGCAACCAGCAGAACCTGGGGACCATCAAATGCAGCAACCTGTGT 289377 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430 |||||||| |||||| ||| |||||||||| Sbjct 289376 ACAGAAATAGTGGAATATACCAGCAAAGATGAG 289344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620650910329520