Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq737 87.8 3e-12 >seq737 Length=313774 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 || || |||| || || || ||||||||||||||| |||||| ||||||||||| ||| Sbjct 289357 GTATATTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGG 289416 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||| |||| ||| || ||||| |||||||| || | |||||||| ||| Sbjct 289417 TTGCTCTTCCTGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCCGTCTGA 289476 Query 213648 GACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCAC 213688 || | | || | |||||| | | |||||| ||||| Sbjct 289477 GATTCAATGATAGCGTACCAGAGCTGCTGGGCCTTCACCAC 289517 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 |||| || ||| || || || || | ||| || || ||| ||||| |||| | | | Sbjct 290599 ACTCGCTTCATAAAGAGATCAGGAATCCAGAGGGCAAAGAAGAGGTCTCTGGCTCGCTGC 290658 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || ||||| ||| || | || ||||| |||||||||||| ||||||||| Sbjct 290659 TCTTCTTTTCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCACGGC 290718 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||| |||||||||||| || || || |||| Sbjct 290719 TCCAGGTAGATGGCAAAAGCCCCGGGTCTCT 290749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931395503709440