Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1389 82.4 9e-11 seq737 82.4 9e-11 >seq1389 Length=9232658 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| || || || |||||||| || || || || ||| ||||| | |||| Sbjct 5781055 TTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTT-TGCTGCTATATTTTGG 5780997 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| || ||||| || || ||||| |||||||||||| | ||||| Sbjct 5780996 CTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTTATTAGCAGAGAT 5780937 Query 65206 GAGG 65209 |||| Sbjct 5780936 GAGG 5780933 >seq737 Length=313774 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | ||||| | |||| ||||||||||| || ||||| || ||||| ||||| || Sbjct 289496 TGGTACGCTATCATTGAATCTCAGACGGAGACCGGCACACCGTACATGCTGTACAAAGAC 289437 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||| |||| |||||| ||||| |||| |||| || ||||| || || || || Sbjct 289436 TCTTGCAACAGGAAGAGCAACCAGCAGAACCTGGGGACCATCAAATGCAGCAACCTGTGT 289377 Query 75998 ACGGAAAT 76005 || ||||| Sbjct 289376 ACAGAAAT 289369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596481673098080