Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq737 84.2 2e-11 >seq737 Length=313774 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 151327 ATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGAT 151385 ||||| |||||||| | ||||| ||||||||||| || ||| || | || || | Sbjct 289359 ATATTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGG-TCCCCAGGTTCTGCTGGT 289417 Query 151386 TGCTTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAA 151445 |||| || | |||||||| ||| ||||| | |||||||||||||||||| || | ||| Sbjct 289418 TGCTCTTCCTGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCCGTCTGAG 289477 Query 151446 TTTCTATAAT 151455 ||| || || Sbjct 289478 ATTCAATGAT 289487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488471994721200