Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2186 129 6e-25 seq673 109 5e-19 seq737 95.1 1e-14 >seq2186 Length=3828881 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||||| || ||||| || ||||| || || ||| | || || ||| Sbjct 2467706 AAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGC 2467765 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || | || |||| |||||| || || || |||||||||||||| |||| Sbjct 2467766 TGCTTGCCAGCAAAGATCAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATC 2467825 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| Sbjct 2467826 TTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCC 2467885 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 2467886 GTCAGGGTCTTCACGAAGATCTGCAT 2467911 >seq673 Length=3179169 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | || |||||| ||||| || ||||| || || | | | ||| || ||||| Sbjct 2476493 ATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTG 2476552 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | | |||| ||||||||| || || || ||||||||||| |||||| Sbjct 2476553 CTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTT 2476612 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| |||||| || || | ||| | ||| ||||| || Sbjct 2476613 GGCCTTCACATTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 2476672 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 |||||| | || || ||||||||| Sbjct 2476673 CAGAGTCGTCACAAAGATCTGCATG 2476697 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | || |||||| ||||| || ||||| || || | | | ||| || ||||| Sbjct 2476721 ATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTG 2476780 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | | |||| ||||||||| || || || ||||||||||| |||||| Sbjct 2476781 CTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTT 2476840 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| |||||| || || | ||| | ||| ||||| || Sbjct 2476841 GGCCTTCACATTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 2476900 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 |||||| | || || ||||||||| Sbjct 2476901 CAGAGTCGTCACAAAGATCTGCATG 2476925 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | || |||||| ||||| || ||||| || || | | | ||| || ||||| Sbjct 2476949 ATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTG 2477008 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | | |||| ||||||||| || || || ||||||||||| |||||| Sbjct 2477009 CTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTT 2477068 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| |||||| || || | ||| | ||| ||||| || Sbjct 2477069 GGCCTTCACATTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 2477128 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 |||||| | || || ||||||||| Sbjct 2477129 CAGAGTCGTCACAAAGATCTGCATG 2477153 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | || |||||| ||||| || ||||| || || | | | ||| || ||||| Sbjct 2477177 ATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTG 2477236 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | | |||| ||||||||| || || || ||||||||||| |||||| Sbjct 2477237 CTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTT 2477296 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| |||||| || || | ||| | ||| ||||| || Sbjct 2477297 GGCCTTCACATTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 2477356 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 |||||| | || || ||||||||| Sbjct 2477357 CAGAGTCGTCACAAAGATCTGCATG 2477381 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | || |||||| ||||| || ||||| || || | | | ||| || ||||| Sbjct 2477405 ATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAGACAGGGGGCGCCCGTCTTCCAGCTG 2477464 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | | |||| ||||||||| || || || ||||||||||| |||||| Sbjct 2477465 CTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCCTGGATCTT 2477524 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| |||||| || || | ||| | ||| ||||| || Sbjct 2477525 GGCCTTCACATTCTCAATGGTGTCACGGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 2477584 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || ||||||||| Sbjct 2477585 CAGGGTCTTCACAAAGATCTGCATG 2477609 >seq737 Length=313774 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 || || || || || | ||||| |||||||||||||| |||| ||||| || ||| Sbjct 289360 TATTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGGTTG 289419 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTT 148985 ||||| |||||||| | ||| |||||||||||||||||| ||| || ||| ||| | | Sbjct 289420 CTCTTCCTGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCCGTCTGAGAT 289479 Query 148986 TC 148987 || Sbjct 289480 TC 289481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483349549816840