Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2456 194 2e-43 seq1663 194 2e-43 seq1595 194 2e-43 seq1930 185 1e-40 seq1155 140 5e-27 seq1039 140 5e-27 >seq2456 Length=4228489 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 6941 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 6994 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| ||| Sbjct 6995 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 7054 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 7055 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 7114 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7115 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7163 >seq1663 Length=24702 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 11425 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 11372 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| ||| Sbjct 11371 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 11312 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 11311 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 11252 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 11251 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 11203 >seq1595 Length=55366 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 45997 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 45944 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| ||| Sbjct 45943 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 45884 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 45883 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 45824 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 45823 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 45775 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 53353 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCATCCAAGGCCATG 53406 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| ||| Sbjct 53407 AGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 53466 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 53467 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 53526 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 53527 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 53575 >seq1930 Length=317118 Score = 185 bits (204), Expect = 1e-40 Identities = 179/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 24908 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 24961 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| ||| Sbjct 24962 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 25021 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 25022 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 25081 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| |||||||| | |||||||||||| Sbjct 25082 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGCCCCCGAGGGCACCA 25130 Score = 123 bits (136), Expect = 4e-22 Identities = 164/229 (72%), Gaps = 28/229 (12%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 12856 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 12909 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || ||| ||| | ||| ||| Sbjct 12910 GGCATCATGAACTCCTT---------------CGGCCG----GGC---GGGGCGTCGCGC 12947 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 12948 CTGGCGCCCTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 13007 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 13008 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 13056 Score = 95.1 bits (104), Expect = 2e-13 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 725048 CAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGG 725107 ||||||| ||| ||| | |||| ||||||||||| |||||||| || | ||| ||| Sbjct 51041 CAAGCGCCCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGGCTCCTGCTGCCCGG 50982 Query 725108 CGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| ||||||| |||||||||||| |||||||||| Sbjct 50981 CGAGCTGGCCAAGCACGCCGTCTCTGAGGGCACCA 50947 Score = 91.5 bits (100), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 725068 CGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCG 725127 |||| ||||||||||| |||||||| || | ||| |||||| ||||||| |||||||| Sbjct 26161 CGCGGGAGATCCAGACGGCCGTGCGGCTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCG 26102 Query 725128 TCTCCGAGGGCACCA 725142 ||||||||||||||| Sbjct 26101 TCTCCGAGGGCACCA 26087 Score = 91.5 bits (100), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 725068 CGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCG 725127 |||| ||||||||||| |||||||| || | ||| |||||| ||||||| |||||||| Sbjct 28362 CGCGGGAGATCCAGACGGCCGTGCGGCTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCG 28421 Query 725128 TCTCCGAGGGCACCA 725142 ||||||||||||||| Sbjct 28422 TCTCCGAGGGCACCA 28436 Score = 91.5 bits (100), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 725068 CGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCG 725127 |||| ||||||||||| |||||||| || | ||| |||||| ||||||| |||||||| Sbjct 44641 CGCGGGAGATCCAGACGGCCGTGCGGCTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCG 44700 Query 725128 TCTCCGAGGGCACCA 725142 ||||||||||||||| Sbjct 44701 TCTCCGAGGGCACCA 44715 >seq1155 Length=1068339 Score = 140 bits (154), Expect = 5e-27 Identities = 172/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| ||||||||||||||| | ||||| ||| | |||| || Sbjct 861754 ATCTACAAGGTGCTGAAGCAGGTGCACCCCGACA----TGGGC-ATCTTGTC-CAAGGCC 861701 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| |||| || ||||| | || |||| | || ||||||| Sbjct 861700 ATGGGCATCATGAACTCCTTTGCAAATGACATCTTTGAGTGCATTGCCAGCGAGGCCTCG 861641 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 | |||||||| || ||||||| || ||| ||| | | || ||||||||||| |||||| Sbjct 861640 CACCTGGCGCACTACAACAAGTGCTCCACCATCACCTCACGGGAGATCCAGACGGCCGTG 861581 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || | ||| || || |||||| |||| || ||||||||||||||| Sbjct 861580 TGGCTCCTGCTGCTTGGTGAGTTGGCCAAGCACACCATCTCCGAGGGCACCA 861529 >seq1039 Length=2233811 Score = 140 bits (154), Expect = 5e-27 Identities = 178/244 (73%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||||| |||||||| |||||| |||| |||| Sbjct 1986342 TACTCCATCTATGTCTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC- 1986289 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||| |||| ||||| ||||||||||| || ||||| ||||| | || ||||||| Sbjct 1986288 TCCTCCAAGGCCATGGGCATCATGAACTCCTTCGTCAATGACATCTTTGAGCGCATCGCT 1986229 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || ||| |||||||| | || |||||||||| ||| || | | || ||||| Sbjct 1986228 GGAGAAGCCTCCCGCCTGGCCCACTACAACAAGCGCTCCACCATTACCTCCCGGGAGATT 1986169 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| || ||||||||| | | | || || |||||| |||||| ||||| |||||| Sbjct 1986168 CAGACGGCTGTGCGCCTGCTGCTCCCGGGAGAGTTGGCCAAGCACGCTGTCTCGGAGGGC 1986109 Query 725139 ACCA 725142 |||| Sbjct 1986108 ACCA 1986105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176673936378142