Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq673 140 2e-28 seq2186 134 1e-26 >seq673 Length=3179169 Score = 140 bits (154), Expect = 2e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||| || || || | | |||||| || |||||||| || Sbjct 2477378 CATGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTC 2477437 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||||| |||| ||||||||||| |||||||||| || | |||||| || | Sbjct 2477438 AGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGG 2477497 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| ||||| ||||| | | |||||||| || || Sbjct 2477498 GGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTC 2477557 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| | ||||| ||||| || || ||||||||||| ||||| |||||| || Sbjct 2477558 AACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 2477612 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||| || || || | | |||||| || |||||||| || Sbjct 2476694 CATGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTC 2476753 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||||| |||| ||||||||||| |||||||||| || | |||||| || | Sbjct 2476754 AGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGG 2476813 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| ||||| ||||| | | |||||||| || || Sbjct 2476814 GGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTC 2476873 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | ||||| ||||| || || || ||| |||| ||||| |||||| Sbjct 2476874 AACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCATG 2476925 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||| || || || | | |||||| || |||||||| || Sbjct 2476922 CATGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTC 2476981 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||||| |||| ||||||||||| |||||||||| || | |||||| || | Sbjct 2476982 AGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGG 2477041 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| ||||| ||||| | | |||||||| || || Sbjct 2477042 GGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTC 2477101 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | ||||| ||||| || || || ||| |||| ||||| |||||| Sbjct 2477102 AACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCATG 2477153 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||| || || || | | |||||| || |||||||| || Sbjct 2477150 CATGCCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTC 2477209 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||||| |||| ||||||||||| |||||||||| || | |||||| || | Sbjct 2477210 AGACAGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGG 2477269 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||||||| ||| ||||| ||||| | | |||||||| || || Sbjct 2477270 GGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTC 2477329 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | ||||| ||||| || || || ||| |||| ||||| |||||| Sbjct 2477330 AACCTCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCATG 2477381 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || ||| || || || | | |||||| || |||||||| || | Sbjct 2476470 CCACCCCTCAGGCGCAGCACGAGATGGAGGGAGGACTCCTTCTGAATGTTGTAGTCAGAC 2476529 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||||| |||| ||||||||||| |||||||||| || | |||||| || | || Sbjct 2476530 AGGGGGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGACCAGCCTCTGCTGGTCAGGGGGA 2476589 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||||||| ||| ||||| ||||| | | |||||||| || || ||| Sbjct 2476590 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACGGGGCTCAACC 2476649 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | ||||| ||||| || || || ||| |||| ||||| |||||| Sbjct 2476650 TCAAGGGTAATGGTCTTGCCAGTCAGAGTCGTCACAAAGATCTGCATG 2476697 >seq2186 Length=3828881 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || |||| ||| || ||| ||||| ||||||||||| || | Sbjct 2467685 CCACCCCTCAGGCGCAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 2467744 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || ||||||||||| || |||||||||| | ||||||||| | || Sbjct 2467745 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCCGGGGGA 2467804 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| ||||| ||| | | | |||||||| || || ||| Sbjct 2467805 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 2467864 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || ||||| ||||| ||||||||||||||||| ||||| Sbjct 2467865 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2467911 Score = 129 bits (142), Expect = 4e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || ||||| | || |||| ||| || ||| ||||| ||||||||||| Sbjct 2468048 TTGCATGCCACCCCTCAGGCGCAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTA 2468107 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | || |||| | || |||||| |||| || |||||||||| | |||||| || Sbjct 2468108 GTCAGACAGGGTGCGCCCATCTTCCAGCGGCTTGCCAGCAAAGATCAGCCTCTGCTGCTC 2468167 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || ||||| ||| ||||| ||| | | | |||||||| || Sbjct 2468168 TGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGG 2468227 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||| || || ||||| ||||| ||||||||||||||||| ||||| Sbjct 2468228 CTCAACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2468281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359938668367047