Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq48153 123 2e-23 >seq48153 Length=1917 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || ||||| | ||||||| |||| ||||| ||||| || ||||| ||||| Sbjct 1183 GTTACCACCCCGCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 1242 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | |||||| || | || |||||||| || || || | || || |||||||| ||| Sbjct 1243 AGACAGGGTACGGCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGG 1302 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | ||| ||||| || |||||| || || | | | || |||| |||||| Sbjct 1303 GGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTC 1362 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | |||| ||| ||||||||||| || | || |||||||| || ||||| Sbjct 1363 CACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1413 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | ||| || ||||| || || || || || ||||| | Sbjct 1415 CCACCACGCAGGCGCAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAG 1474 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || |||||||| || || Sbjct 1475 AGGGTACGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 1534 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | || |||| ||||||| Sbjct 1535 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 1594 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || |||||||| || ||||| Sbjct 1595 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1641 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | ||| || ||||| || || || || || ||||| | Sbjct 1643 CCACCACGCAGGCGCAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAG 1702 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| ||||| ||| | || || |||||||| || || Sbjct 1703 AGGGTACGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 1762 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | || |||| ||||||| Sbjct 1763 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 1822 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || |||||||| || ||||| Sbjct 1823 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421936533139484