Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq49365 105 5e-18 >seq49365 Length=32034 Score = 105 bits (116), Expect = 5e-18 Identities = 121/162 (75%), Gaps = 8/162 (5%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| || || || || ||| Sbjct 29423 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAGATCCCCCTCCTCT 29482 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || |||||||| ||||||||||| Sbjct 29483 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 29538 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCC 97559 | |||||| ||| | ||||||||| | | ||||| || Sbjct 29539 CTTCACACCCTTTGCAGAGAGCTCTTTGGTATTTGTAGAACC 29580 Score = 86.0 bits (94), Expect = 4e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| || || || |||||||| ||| Sbjct 26110 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCGATATTGAAAGGCACTCCT 26169 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGA-AAGCTTTCCATCACACACATA 97235 ||||||||||| | || || ||||| | || || || || ||| | | | ||||| Sbjct 26170 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCATCCTTTAGA-ACATA 26228 Query 97236 AAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 |||||| | | |||| || || ||||| ||||| Sbjct 26229 AAACTGGCAAAGGGCATGGCACGGAGGCAAAGCCAT 26264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346519007065430