Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq48153 114 8e-21 >seq48153 Length=1917 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| ||| | || ||| ||||| ||||||||||| ||| Sbjct 1187 CCACCCCGCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 1246 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| |||||| || ||||| || |||| |||||| || ||| Sbjct 1247 AGGGTACGGCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGG 1306 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | || | || | | || || Sbjct 1307 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 1366 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||||| ||||| || || || || ||||||||||||||| Sbjct 1367 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATC 1414 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| || ||||| || ||||||||| || ||||||||||| Sbjct 1415 CCACCACGCAGGCGCAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAG 1474 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| ||||||||| || || || |||| |||||| || || Sbjct 1475 AGGGTACGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 1534 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | || | || | | || || Sbjct 1535 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 1594 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||||| ||||| || || || || ||||||||||||||| Sbjct 1595 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATC 1642 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| || ||||| || ||||||||| || ||||||||||| Sbjct 1643 CCACCACGCAGGCGCAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAG 1702 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| ||||||||| || || || |||| |||||| || || Sbjct 1703 AGGGTACGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 1762 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | || | || | | || || Sbjct 1763 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 1822 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||||| ||||| || || || || ||||||||||||||| Sbjct 1823 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATC 1870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322825126449440