Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq32563 105 6e-18 seq28635 89.7 5e-13 >seq32563 Length=19397 Score = 105 bits (116), Expect = 6e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 15888 AAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTTTTT 15947 ||||||| ||| |||| || ||||| || || | | || |||||| | | || Sbjct 16148 AAAAATCTGCATCCAGAGTGAAGACATTGTCCATTGTTTCTGCCATAACAGCAAAACGTT 16089 Query 15948 GATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCA 16007 ||||||| ||| | ||| ||||||||||||||||||||||| | |||||||| |||| Sbjct 16088 GATATTCCGAAACCCGCTTCTCAAAGAAATTTGTTTTTCCTTCCAGAGAAATATTCTCCA 16029 Query 16008 TAAAATCAAAAGGATTTTTTG 16028 | |||||||||||||||| || Sbjct 16028 TGAAATCAAAAGGATTTTCTG 16008 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || || | || || || || || || || ||||| || || | || || Sbjct 10285 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 10226 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | |||||||||||| ||||| ||||| |||||||| || ||||||||||| ||||| ||| Sbjct 10225 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 10166 Query 16379 ACCAATCGCTCACC 16392 |||| || |||||| Sbjct 10165 ACCACTCTCTCACC 10152 >seq28635 Length=94282 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || || | ||| || ||||| || || || ||||||| ||||| ||| || Sbjct 91110 TCATCTCTGCTGATGAGCTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 91169 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | |||||| || | ||||| || ||||||||||| || ||||| ||||| ||||| || Sbjct 91170 AGCCAAAAAATTGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 91229 Query 16379 AC 16380 || Sbjct 91230 AC 91231 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 15926 TTTGACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTT 15985 |||||||| ||| ||| | |||||||||| ||||| ||| ||||||||||| ||||| Sbjct 89648 TTTGACATGACTCCCATCCTCTGATATTCACCAACTCGCTTCTCAAAGAAATTGGTTTTC 89707 Query 15986 CCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATT 16023 ||||| | || || || ||||| || ||||| ||||| Sbjct 89708 CCTTCCAGAGAGATGTTCTCCATGAAGTCAAAGGGATT 89745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462149512001400