Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq48153 100 2e-16 >seq48153 Length=1917 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 18094 GTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGT 18153 |||| || ||||| || | || |||| ||| || || ||||| || || |||||||||| Sbjct 1183 GTTA-CCACCCCGCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGT 1241 Query 18154 CGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCA 18213 | | || || | |||||||| || || || || |||| || || || |||||| Sbjct 1242 CAGACAGGGTACGGCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCG 1301 Query 18214 CGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCT 18273 ||| | ||| |||||||| || | |||||| | ||| ||||||| ||||| Sbjct 1302 GGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCT 1361 Query 18274 CGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || | ||||||| | ||||| |||| || || ||||| || ||||| Sbjct 1362 CCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379054126534755