Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14636 111 1e-19 seq60581 98.7 9e-16 >seq14636 Length=6855 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| || ||| ||||||||| || || || ||||| | |||||| || || || ||| Sbjct 1134 ACCTCATCCTTGCTCGTGTACTCCACGATCTCCGTACACAAATTGCTGCATTTGATGGTG 1193 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || ||| ||||| || || ||||| || || ||||| ||||||||||||||| Sbjct 1194 CCCAGGTTCTGCTGATTGCTCTTCCGGTTGCAGGAGTCTTTGTACAGCATGTACGGCGTG 1253 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| || || ||||| || Sbjct 1254 CCGGTCTCCGTCTGGGATTCAATGATGGC 1282 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 ||||||| || |||| || ||||| || ||||| || || |||| || || | ||||| Sbjct 2874 TTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGGGCAAAGAAAAGGTCCCTGGCGC 2933 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 || || || || ||||||||||| ||||| |||| || || || | |||| ||||| Sbjct 2934 GCTGTTCTTCCTTCCCGGTGTTCTTCTTCAAGTCCAGGAACTCGAAGATGTCCAAATGCC 2993 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495 ||||||| ||||| | ||| || || || ||||||| Sbjct 2994 ACGGCTCCAGGTAGATGGCGAAAGCCCCGGGTCTCT 3029 >seq60581 Length=975 Score = 98.7 bits (108), Expect = 9e-16 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 22696 GCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGC 22755 ||| ||||||||||||||||| || | | |||||| |||||||| || |||||||| Sbjct 107 GCCCTCGTACGTTTCGTACGGCCCTTGCTCCTTGGCAAGCTCGCAGCTGGCTTCCAACGC 166 Query 22756 GCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA-ATTCGGCGGCGGCGACGCTTTCGT 22814 ||||||||| || |||||||| || | || ||| | | || || || ||| ||| Sbjct 167 GCCGTAATAAATGGTCTCGAAAATCTGCTGGTTGAGGAGCTGC-GCCTCGGGGCTCTCGA 225 Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 | || | ||||| | ||| ||||| |||| ||||| || || || ||||| || | Sbjct 226 AGGGGTACCTCATCAGGATGAAGGCGTCTGCCAGCCCCTGCACCCCGATGCCGATGGGAC 285 Query 22875 GGT 22877 ||| Sbjct 286 GGT 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445417036156080