Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq28635 120 3e-22 seq32563 102 8e-17 >seq28635 Length=94282 Score = 120 bits (132), Expect = 3e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || || ||||||||||| || | ||| ||||| ||||||| ||| || Sbjct 91110 TCATCTCTGCTGATGAGCTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 91169 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||||| || | ||||| || ||||||||||| ||||| ||||| |||||||| ||| Sbjct 91170 AGCCAAAAAATTGATGCAAAAGACCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 91229 Query 11774 ACTACTCTTTCTCC 11787 || || | |||||| Sbjct 91230 ACAACGCGTTCTCC 91243 >seq32563 Length=19397 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || |||||||| || || || | ||| ||||||| || | || || Sbjct 10285 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 10226 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||||||||||||||||| ||||| |||||||| || || || || || ||||| || Sbjct 10225 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 10166 Query 11774 ACTACTCTTTCTCC 11787 || ||||| || || Sbjct 10165 ACCACTCTCTCACC 10152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468157599544560