Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq14636 82.4 8e-11 >seq14636 Length=6855 Score = 82.4 bits (90), Expect = 8e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 157106 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACT-TTGATTGCTTTT 157164 || || |||| |||||||||||||||||| || | | || | || |||||||| || Sbjct 1158 ACGATCTCCGTACACAAATTGCTGCATTTGAT-GGTGCCCAGGTTCTGCTGATTGCTCTT 1216 Query 157165 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTAT 157224 |||||||| | ||| ||||| | ||||||||| |||||||| || | || ||| || Sbjct 1217 CCGGTTGCAGGAGTCTTTGTACAGCATGTACGGCGTGCCGGTCTCCGTCTGGGATTCAAT 1276 Query 157225 GATG 157228 |||| Sbjct 1277 GATG 1280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506617033801680