Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq48153 118 9e-22 seq14636 86.0 5e-12 >seq48153 Length=1917 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || |||| || || ||||| ||| Sbjct 1642 GATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1583 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || || |||||||| || ||||| || ||||| Sbjct 1582 TGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCA 1523 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| ||||| ||| | || ||| ||| ||| ||||||| ||||| Sbjct 1522 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACCCTCTCCGACTACAA 1463 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||||||| ||||| | || |||| |||| || || Sbjct 1462 TATCCAGAAAGAATCCACCTTACATCTCGTGCTGCGCCTGCGTGGTGG 1415 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || |||| || || ||||| ||| Sbjct 1870 GATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1811 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | || | |||| || || || |||||||| || ||||| || ||||| Sbjct 1810 TGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCA 1751 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| ||||| ||| | || ||| ||| ||| ||||||| ||||| Sbjct 1750 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACCCTCTCCGACTACAA 1691 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||||||| ||||| | || |||| |||| || || Sbjct 1690 TATCCAGAAAGAATCCACCTTACATCTCGTGCTGCGCCTGCGTGGTGG 1643 >seq14636 Length=6855 Score = 86.0 bits (94), Expect = 5e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 129737 TGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGAT 129796 ||||||| || || || | |||||||| || ||| |||||||||| | || |||| Sbjct 1150 TGTACTCCACGATCTCCGTACACAAATTGCTGCATTTGATGGTGCCCAGGTTCTGCTGAT 1209 Query 129797 TACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848 | || ||| |||||| | |||||||||| ||||||||||||||| || || Sbjct 1210 TGCTCTTCCGGTTGCAGGAGTCTTTGTACAGCATGTACGGCGTGCCGGTCTC 1261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419407267340935