Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq27628 114 2e-20 seq12701 86.0 1e-11 >seq27628 Length=935 Score = 114 bits (126), Expect = 2e-20 Identities = 90/105 (86%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGA-TCTGC 204015 || ||||| ||||| ||||| ||||||||||| ||||||||||| ||||||| || || Sbjct 826 GGCTCGGCGATGTGGATGTTGAGAGACTGGCTCTGGTCGATGAA-GGCGCCCCTGTCCGC 768 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||| |||| |||||||||||| || ||||||||||||||||| Sbjct 767 TGCCATCTTGAGAATGGTCTTCTGGGAGATCTCCCACACCGTCTT 723 >seq12701 Length=3095 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 |||||| || ||||| || |||| || ||| | | ||| ||||| | || |||| | Sbjct 1299 CTGAAACTCCCCGGAGAGGACCCTGCGCGTGTAGATGTTACTGGTGTAGGGCTCGATGGA 1240 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||||||||||| | ||||||||||| ||| || |||||||||| ||||| ||| Sbjct 1239 TTCGTTGTTGCCCAGGATCTGAGCGGTAGAGGCGGTTGGCATGGGAGAGAGGAGAAGGCT 1180 Query 204316 GTTGCGCACACCGTA 204330 ||| | |||||||| Sbjct 1179 GTTTCTGACACCGTA 1165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794532007051440