Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq48153 118 2e-21 >seq48153 Length=1917 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| || || || ||||| |||| ||||||||||| || || Sbjct 1193 CGCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTA 1252 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || |||||||| || | |||||| ||||| || || Sbjct 1253 CGGCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGGATGCCC 1312 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | |||||| | | || || |||| Sbjct 1313 TCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGG 1372 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || || ||||| || || Sbjct 1373 GTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTG 1410 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || | || || || || |||| |||||||| | | || Sbjct 1421 CGCAGGCGCAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTA 1480 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| || | |||||| || ||| ||| ||| Sbjct 1481 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCT 1540 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | |||||| | | || || |||| Sbjct 1541 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGG 1600 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || || ||||| || || Sbjct 1601 GTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTG 1638 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || | || || || || |||| |||||||| | | || Sbjct 1649 CGCAGGCGCAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTA 1708 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| || | |||||| || ||| ||| ||| Sbjct 1709 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCT 1768 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | |||||| | | || || |||| Sbjct 1769 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGG 1828 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || || ||||| || || Sbjct 1829 GTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTG 1866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177974535805833