Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq28898 262 5e-65 seq19570 129 7e-25 >seq28898 Length=2938 Score = 262 bits (290), Expect = 5e-65 Identities = 1031/1602 (64%), Gaps = 42/1602 (3%) Strand=Plus/Minus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| ||||| || || ||||| ||||| || ||||| || || Sbjct 2133 TTCATCCTCCGCTTTGTACTTCTCTGCTTCTTGCACCATGCGGTCGATGTCATCCTTGCT 2074 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTT 6686 | | ||||| || || || || || ||||| ||| ||| || | | ||| ||| Sbjct 2073 CAGGCGACCCTTGTCGTTGGTGATGGTGATCTTGTTCTCCTTT-CCTGTGCTCTTGTCTA 2015 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 |||| || || || | |||||||| ||||| | || || | || | || || || Sbjct 2014 CAGCGCTGACGTTAAGGATACCATTGGCATCGATGTCAAAGGTGACCTCGATCTGGGGG- 1956 Query 6747 TACCCCTCGG--TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 ||||| ||| ||| | || || || |||| ||||| | || || || |||| || Sbjct 1955 -ACCCCACGGGGTGCTGGGGGGATGCCAGTTAGGTCAAACTTGCCCAGCAAGTTGTTGTC 1897 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTT 6863 | ||| | | | ||||| || || || | | || || | | || || || Sbjct 1896 CTTCGTCATAGCCCTCTCACCCTCGTACACCTGGACCAGGAC-GCTGCTCTGGTTGTCGG 1838 Query 6864 GTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || | |||| | || || || | ||||| || || || | | || | | Sbjct 1837 AGTAGGTGGTGAAGGTCTGGGTTTGTTTGGTGGGAATGGTGGTGTTGCGCTTGATGAGAG 1778 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 ||||| | ||||| || |||| || || |||||||| || || || ||||| | Sbjct 1777 CAGTCATCACTCCACCGGCCGTCTCGATGCCCAGGGACAGAGGGGTAACATCTAAGAGCA 1718 Query 6984 ACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCC 7043 ||| || || || ||| | || ||| | | ||| || |||||||| | || | Sbjct 1717 GCAGATCCTGCACGTTCTCGGACTTGTCTCCCATGAGGATAGCTGCTTGGACGGCAGCAC 1658 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 |||| || || |||||||||||||| || | || || || || || || || || | | Sbjct 1657 CGTAAGCAACAGCCTCATCGGGGTTGATGCTCTTGTTGAGCTCCTTGCCATTGAAGAAGT 1598 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 || || || | ||| || || ||||| || || || ||||| |||| ||||| || | Sbjct 1597 CCTGTAGCAGCTTTTGGATCTTGGGGATACGGGTGGAGCCACCCACCAGCACGATCTCCT 1538 Query 7164 TCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 | | || || | ||| | || || || | || || || || |||| Sbjct 1537 GGATCTGGCCCTTGTCTAGCTTGGCATCACGCAGAGCCTTCTCCACTGGCTCCAGGGTGC 1478 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 |||||| | || | || ||||| || || ||||| ||||| || || ||||| | Sbjct 1477 CACGGAAGAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTAATAGAGGTGTAGAAGT 1418 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT---AACG 7340 ||| ||| ||||| | || || || |||||| | | ||| ||| ||||| | | Sbjct 1417 CAATGCCCTCGTAGAGGGAGTCGATCTCAATGCTAGCTTG---CGTGGAAGAGCTGAGAG 1361 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 | ||||| || | ||| || ||||| || | || | | || ||| ||| |||| | Sbjct 1360 TGCGCTTCGCCCTCTCGCAAGCCGTACGCAGTCGCCTCACCGCTCGCTTGTTGCCGGCGA 1301 Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTC-AGAGAAGTGTCGA--AGGAGTCTCGAAT 7457 | || ||| || ||||| || || ||||| | | || || | | | | | | Sbjct 1300 TGTCACGCTTGTGCTTACGCTTGAATTCTTCCACAAAATGGTTCACCATGCGGTTG---T 1244 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | || || || ||||||| ||| || || || || || | || || |||||||| || Sbjct 1243 CAAAGTCCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATGCCAT 1184 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | |||||| | | | || |||||||| || || || |||| |||||| ||||| || | Sbjct 1183 CCTCAATGGTAAGGATGGACACATCAAAAGTGCCCCCTCCCAAGTCAAAGATGAGCACAT 1124 Query 7578 TCGTATCGTCGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 || | || | | | ||||| || | || || || || || || ||||| | Sbjct 1123 TCTTCTCTCCCGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATCGCAGCTGCCGTGG 1064 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 | || || |||||||| | ||| ||||||| || || | || ||||| || || | Sbjct 1063 GCTCGTTGATAATACGCATCACGTTAAGGCCAGTGATGGTGCCAGCGTCTTTGGTGGCCT 1004 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | || || || || || ||||| || || || || | ||| || | | || || | Sbjct 1003 GGCGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGCATTCTGCACCTTGCGCC 944 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | ||||| | || || || || |||||||||||||| ||||| || ||||| || | Sbjct 943 CCAGATAGGCCTCAGCAATCTCCTTCATTTTGGTAAGGACCATGGAGCTGATCTCCTC-G 885 Query 7812 CCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCA 7870 | | | || ||| | ||||| || | || |||| | | |||| || || || Sbjct 884 GGGAAGAAGGTCTTCATCTCACCCTTGTACTCCACTTGTACCTTGGGCTT----GC--CA 831 Query 7871 CCGGGGATAACC---TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAA 7927 || | | ||| | | ||| | |||| || || ||| |||| | Sbjct 830 CCCTCGTTCACCACGCGGAAGGGCCAGTGCTTCACGTCAGACTGCACCGTGGGGTCATCA 771 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 |||| | ||||| |||||||| ||||| || | ||||| |||||||||| || Sbjct 770 TACTTGCGGCCGATGAGACGCTTGGCATCGAAGATGGTGTTGGTGGGGTTCATCGCCACC 711 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 |||||||| || ||||| ||||| || || || || || || || || || || | | Sbjct 710 TGGTTCTTGGCAGCGTCACCGATGAGGCGCTCTGTA---TCGGTGAAAGCCACATA-GCT 655 Query 8048 GGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 ||| || || || || || ||||| || || || || || || | | | || |||| Sbjct 654 GGGTGTGGTGCGGTTGCCCTGGTCATTGGCGATGATCTCCACTTTGCCATGCTGGAAGAC 595 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||| ||||| || ||||| || || || || || |||| ||| Sbjct 594 GCCCACGCAGGAGTACGTGGTGCCCAAGTCGATGCCGACTGC 553 >seq19570 Length=26784 Score = 129 bits (142), Expect = 7e-25 Identities = 354/543 (65%), Gaps = 22/543 (4%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 2061 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 2002 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 2001 AAATCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATA 1942 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | | | |||||| |||| || | || || || | ||||| ||||| |||| Sbjct 1941 TCGTGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 1882 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||| | ||| | ||| || || || || || | ||| ||||| || ||| Sbjct 1881 GTGCCACGGAAGAGGTCGGCATTCAGCTCTTCGAAGCGAGCTCTGGTGATGGAGGTGTAG 1822 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | || |||||||| || | | || | | || || | Sbjct 1821 AAGTCAATACCCTCATAGAGAGAGTCAATTTCGATACTGGCCTGCGTACTGGACGACAGA 1762 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || | | ||| || Sbjct 1761 GTACGCTTTGCTCGCTCGCAGGCGGT----------------GTTCTTTTGTTCTCGCTG 1718 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456 || || ||||| || || || || ||||| | |||||| | || | | | | Sbjct 1717 ATGTCCTTCTTGTGCTTGCGCTTGAACTCGGCGATGAAGTGGTTGACCATGCGGTTG--- 1661 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || ||||| | ||| || |||||||| || Sbjct 1660 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCGGTGGATTTCACCTCAAAGATGCCA 1601 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | ||| |||||||| || ||||| || ||||| || || || || Sbjct 1600 TCTTCAATAGTCAGAATCGACACATCAAAGGTGCCACCTCCAAGGTCGAAGATAAGGACA 1541 Query 7577 TTC 7579 ||| Sbjct 1540 TTC 1538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634635022607160