Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq19570 116 3e-20 >seq19570 Length=26784 Score = 116 bits (128), Expect = 3e-20 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| ||| | ||||||||||| ||||| |||||||| || ||||| || || Sbjct 1271 GTTACTAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCCCAGCGTCAGGCAACA 1330 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || ||||||||| ||||| || || ||||| || || || |||||||| || || ||| Sbjct 1331 AAGGATGCTGGAACCATTGCGGGGCTCAATGTGCTGCGAATCATCAATGAGCCGACAGCT 1390 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| | || ||||| || || ||| Sbjct 1391 GCTGCCATAGCCTATGGTCTGGACAAA 1417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4025980194107510