Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq14620 253 2e-62 seq6224 149 7e-31 >seq14620 Length=23486 Score = 253 bits (280), Expect = 2e-62 Identities = 605/909 (67%), Gaps = 7/909 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 |||| |||| || || |||| ||||| || ||||| |||||| || ||| || | Sbjct 11882 TGTGCCGCAAATACTCTTCCAAACATTTCACTGCGAAAGGGTCAACATCAGTGTCAAACT 11823 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || ||||| ||||| ||| | || |||||| || |||||| ||| || | Sbjct 11822 TATTAGCAAACAGGTGGTG---GTTTCGCAGCATCCAGCTCAGGTCTCCCACCCCAAAAA 11766 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | ||| || ||| |||| || ||||| | || ||||| | ||||| Sbjct 11765 CACAGACAGAGCGAACGTGAACTCCGCTGCATGGTGGGTAGGGTGCACCTTTGGACACGT 11706 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| ||||||||||| | || | |||||| || ||||| Sbjct 11705 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCGTTCATGTCAGAAACGTCGT 11646 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || || | ||| ||||| || || | || || | ||| | || |||||| Sbjct 11645 ACTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGGGATCCTCTGAATTGTTGCCCAC 11587 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 |||| || || |||||||| ||||| || | ||| || | |||| ||| ||| Sbjct 11586 AGGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAACAAACTGGAGTATTTTGCTG 11527 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | || | || | ||| | || ||||| || || || || || || Sbjct 11526 CTTTCTAATACATATTCTACAAACCGCCTGCTAACTACAAAATAGGCACTACCAGAAAAA 11467 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 ||||| | | |||||| | |||||| || ||||| | || | Sbjct 11466 ATCGGAGTACTGAGAGGCGGTAGTTTTTTGTCTATGCCTGTGTTCTTTATTTTACCATCA 11407 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | | || |||| |||||||| || || | ||||| ||| || || Sbjct 11406 ATAACCTCATGGTGCTTTTTCCACCTTACTTCTTTATAAACGGGCATTTTTTCTGTTTCC 11347 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || || |||| ||||| | Sbjct 11346 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATA 11287 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 || ||||| | || || | |||||| | ||| ||||| || | ||| || ||| Sbjct 11286 GGGAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAGCTTCTTCTGTAGAGG 11227 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| ||||||||||| | |||||| ||||| || || || ||||| Sbjct 11226 TCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATATACAACACTCTCT 11167 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | |||| | |||||| ||||| ||||| || || |||||| ||||| ||| || Sbjct 11166 AACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACCG-CAGCAAA 11108 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | |||| ||| || || | ||| || | |||||||| || ||||| Sbjct 11107 AAAAGATTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGAT 11048 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | || || | || || | |||||| || || |||| | ||| || || || || || Sbjct 11047 TGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAATAAGCAAT 10988 Query 160943 CGGAAACTC 160951 ||||| || Sbjct 10987 TGGAAATTC 10979 >seq6224 Length=1053 Score = 149 bits (164), Expect = 7e-31 Identities = 572/886 (65%), Gaps = 32/886 (4%) Strand=Plus/Plus Query 160097 GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGA 160156 |||||| || || || || || ||||| | ||| || | |||| ||||||| || Sbjct 14 GTCGAACTTGTTGGCCAAGAGGTGGTGC---TGCTGGAGCAGCCAGGGCACGTCACCCAC 70 Query 160157 CCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTT 160216 |||| | | ||||||||| || |||| |||| |||| || ||||| | || || || Sbjct 71 CCCGTAGATGCAGACGGAGCGCTGGTGCTGGCCGGTGCAGGGTGGGTAGGGCGCGCCCTT 130 Query 160217 CGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGA 160276 ||| || || ||||||||||||||| | | || | || | |||||| || Sbjct 131 GCTGGTGTCGCCCTCCAGGTACTGCCACTTCACCAGGCGGGGCAGGGCGTTCATGTCCGA 190 Query 160277 GGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGT 160336 | | | |||| || |||| | ||| || || || |||||||| || | ||||| Sbjct 191 CTGCTGGAACTTGTCACTCTGGGGCATGGCCCCCGGCACACCGGGCATGCGGTTGAGGGT 250 Query 160337 GGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGA 160395 |||||| | ||| |||||||||||||| |||||||| | ||| || | ||||| || || Sbjct 251 GGCCCAGACGTGCTCGTCGGGGCTGTAGGTGTCCTTCGCCCACTCGAGGAACTGCTGCGC 310 Query 160396 TTAACCTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGC 160455 | || || || | ||| || ||| | || || |||| |||||| ||| Sbjct 311 TGTGGGGTTCTCGAAG-ATGTGCTGTACAAAGGTCCGTGTGACCACAATATACGCGTTGC 369 Query 160456 CGGAGAATATCGG-----TATG-GGTATAGGCGGC-GTGTCTTTGT-CCTGACCGGTGTT 160507 | | ||| || || | || ||| || ||| || ||| ||| ||| |||| Sbjct 370 CCGTGAACATGGGAGAGTTGTGAGGT---GGTGGCAGTTTCTCTGTGGCTGTCCGG---- 422 Query 160508 AGACACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGG 160567 || | | ||| ||| |||| | | || ||| | || |||| | || | Sbjct 423 -GAGATGA---ACTTCCCCACTTCGTGGTGGTACTGCCAGCGCTCCCGCTTGAG-GGCCG 477 Query 160568 CATGCGT-TCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCT 160626 || | || | ||| | ||||| || | ||| |||||| ||| |||| Sbjct 478 AGGGCTTCTCTGACTCCATGCTGTTCCGTCCCTGCAGCACCTTCAGCGCACGGACTATCT 537 Query 160627 CTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA---TT 160683 | || ||||||| || || ||||| || || ||| | ||||| | ||| Sbjct 538 CGGCATTGGTCTTGATGGGGAAATCGGTGCCACAAGTGTTGAGGACGTAGTGCCACGGCA 597 Query 160684 TCGCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGG 160743 | | |||| | |||||||| |||||| || | || ||||||| ||| ||||| Sbjct 598 TGGGGCTC---TGCAGCAGGTCCTGCATGCAGTTGAGGTCGGCCTGCAGCCGGGACCAGG 654 Query 160744 AAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGA 160803 |||| || || ||||| || || ||||||||||||||| || || || | | | Sbjct 655 AAGCATAGACCACGTTTTCCAGGCGACTGGCCACAAAGACATTGGGAAAGCAGGCTGCTA 714 Query 160804 TTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACA 160863 | || ||| ||| ||| | | ||| | ||| ||||| | ||| || | Sbjct 715 TGGCCCGCACGGCCTCCTGGAAGGTGGCTGGGGACTTGCTGTCAACGTGGATGCAGTAGA 774 Query 160864 GGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGA 160923 ||||||||| || |||| || || || | || ||| |||||||| || || | |||| Sbjct 775 CGTTCTGAGGGGCATAGAGGGACCGCAGGAGCCGCTCAAACATCTCGATTTTGTTGTGGA 834 Query 160924 TCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 | || || |||||||| || || ||| | |||||| | ||||| Sbjct 835 TGACCATGGAGTAGGCGATGGGGAACGATGCCTCCTCCTGGCTCAG 880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576766811667240