Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7863 176 5e-38 seq7810 176 5e-38 seq547 176 5e-38 seq11652 170 2e-36 seq47476 167 3e-35 seq39795 152 6e-31 seq10554 134 2e-25 seq28635 107 2e-17 seq14636 98.7 1e-14 >seq7863 Length=7385 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 5967 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 5908 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 5907 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 5848 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 5847 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 5788 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 5787 GCACCTGCTTCAGCACCTTGTA 5766 >seq7810 Length=8894 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 8215 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 8274 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 8275 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 8334 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 8335 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 8394 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 8395 GCACCTGCTTCAGCACCTTGTA 8416 >seq547 Length=1796 Score = 176 bits (194), Expect = 5e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 1128 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 1187 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 1188 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 1247 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 1248 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 1307 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 1308 GCACCTGCTTCAGCACCTTGTA 1329 >seq11652 Length=5695 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 4965 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 4906 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 4905 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 4846 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | || | |||||||| |||||||| Sbjct 4845 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTGGGACGAGATGCCGGTGTCGGGGT 4786 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 4785 GCACCTGCTTCAGCACCTTGTA 4764 >seq47476 Length=776 Score = 167 bits (184), Expect = 3e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||| | ||| | || |||||||| ||||||||||| |||| | || Sbjct 674 GCGTGGCCAGCCCGCGGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 615 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 614 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 555 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 554 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 495 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 494 GCACCTGCTTCAGCACCTTGTA 473 >seq39795 Length=2263 Score = 152 bits (168), Expect = 6e-31 Identities = 140/177 (79%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 ||| |||||||| ||||||||||| |||| | ||| ||| ||||||||| ||||||| Sbjct 528 CAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGTGCGC 469 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || ||||| ||||||| |||| ||||||||||| || |||||||||| Sbjct 468 CAGGCGCGACGCCTCCCCCGCGATGCGCTCGAAGATGTCGTTGACGAAAGAGTTCATGAT 409 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | ||||| ||||||||| |||||||||||||||||| ||||||||||| Sbjct 408 GCCCATGGCCTTGTAGGAGATGCCGTTGTCGGGGTGCACCTGCTTCAGCACCTTGTA 352 >seq10554 Length=42021 Score = 134 bits (148), Expect = 2e-25 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||| ||||| ||||| || | | || Sbjct 30959 GCTTGGCCAGCTCTCCCGGGAGCAGCAGGCGCACGGCCGTCTGAATCTCCCGGGAGGTGA 31018 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| ||| ||| || | ||||| || | | Sbjct 31019 TGGTGGAGCGCTTGTTGTAATGGGCCAGGCGGGAGGCTTCTCCAGCAATGCGCTCAAAGA 31078 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 31079 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 31138 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||||||||||| Sbjct 31139 GGACCTGCTTCAGCACCTTGTAGA 31162 >seq28635 Length=94282 Score = 107 bits (118), Expect = 2e-17 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTG 869889 ||||||||| || ||||||| || ||||||||||| |||||||||| ||| | | || Sbjct 94084 CACCTCCTCTGCCGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTG 94143 Query 869890 GTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 ||| |||| ||||||| ||| |||||| ||||||||| |||| ||| ||||| Sbjct 94144 GTACTGGATGGGGAAGATGACGAAGCGGCGGGGGTTGTCCCGCAGCAGCGGTTC 94197 >seq14636 Length=6855 Score = 98.7 bits (108), Expect = 1e-14 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 1630175 CGGCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGT 1630234 |||| | |||||| || || || ||||||||||| || |||||||| ||||||||||||| Sbjct 5114 CGGCCAGGCCGATCCCACCAGCAGACTTGGAGATCAGGGCGCACTGCTTGAGCGTGTCGT 5173 Query 1630235 AGATGCCCTCGATCGAGTCGGCCTTCATG 1630263 ||||||||||||| ||| |||||||| Sbjct 5174 AGATGCCCTCGATGCTGTCATCCTTCATG 5202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6101993826440583