Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq48153 114 1e-20 >seq48153 Length=1917 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 1414 GATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1355 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || || || || || || || ||||| Sbjct 1354 TGACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGATCA 1295 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||| || ||||| |||||||| ||| | | | |||| || || || Sbjct 1294 GCAGAGGCTGATCTTCGCTGGGAAGCAGCTGGAAGATGGCCGTACCCTGTCTGACTACAA 1235 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| || || ||||||||| |||| |||| || || Sbjct 1234 CATCCAGAAGGAATCCACCCTGCACTTGGTGCTGCGCCTGCGGGGTGG 1187 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 1642 GATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1583 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 1582 TGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCA 1523 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || |||||||| ||| | | | | || || || || Sbjct 1522 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACCCTCTCCGACTACAA 1463 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || |||| | ||| |||| |||| || || Sbjct 1462 TATCCAGAAAGAATCCACCTTACATCTCGTGCTGCGCCTGCGTGGTGG 1415 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 1870 GATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1811 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 1810 TGACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCA 1751 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || |||||||| ||| | | | | || || || || Sbjct 1750 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACCCTCTCCGACTACAA 1691 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || |||| | ||| |||| |||| || || Sbjct 1690 TATCCAGAAAGAATCCACCTTACATCTCGTGCTGCGCCTGCGTGGTGG 1643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449544998379720