Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq48153 136 3e-27 >seq48153 Length=1917 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || || |||| || | ||| |||| ||| | |||| |||||||| ||||| ||||| Sbjct 1184 TTACCACCCCGCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCA 1243 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| | || |||| ||||| ||||| || ||||||||||| | ||||| || | Sbjct 1244 GACAGGGTACGGCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGG 1303 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | |||||||| || | || || |||||| | || | ||| ||| ||| Sbjct 1304 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 1363 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| |||||||| ||||| |||||||| |||||||||||||| Sbjct 1364 ACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1413 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | |||| || ||||| || || ||||| || ||| | || |||| Sbjct 1429 CAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCATC 1488 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| | ||||| ||| | || | || |||||||| Sbjct 1489 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTC 1548 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | ||| ||| ||| || || | ||| ||||| Sbjct 1549 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1608 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| |||||||| |||||||||||||| Sbjct 1609 CTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1641 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | |||| || ||||| || || ||||| || ||| | || |||| Sbjct 1657 CAGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCATC 1716 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| | ||||| ||| | || | || |||||||| Sbjct 1717 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTC 1776 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | ||| ||| ||| || || | ||| ||||| Sbjct 1777 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1836 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| |||||||| |||||||||||||| Sbjct 1837 CTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325443923780681