Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq29043 98.7 9e-16 >seq29043 Length=11906 Score = 98.7 bits (108), Expect = 9e-16 Identities = 126/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 || || ||||| || | || |||||| ||||| | |||||| |||| | | | ||||| Sbjct 5772 AGTATATGGGGACCAACATGTGATGGCCTAGATCGTATTGTTGAGCGTTTTAACATGCCA 5713 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | |||||||| |||||| || | |||||||||||||| || |||| || |||| Sbjct 5712 GAGTTGCAAGTGGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTACA-CTGTTGCAGC 5654 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 |||| || || || || |||| | |||| || |||||||| || || Sbjct 5653 AGCTTCTACTTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATGTC 5603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463182301930320